RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 FAM72DQ6L9T8 149 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 PID1Q7Z2X4 250 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 NET1Q7Z628 596 aaPredicted RBP16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 FAM72BQ86X60 149 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 AGR3Q8TD06 166 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 DDX50Q9BQ39 737 aaKnown RBP16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 PLEKHA5Q9HAU0 1116 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 SPON1Q9HCB6 807 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 MAN1C1Q9NR34 630 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 CACNG4Q9UBN1 327 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 GTF2IRD1Q9UHL9 959 aa16.8■□□□□ 0.28
TM9SF1-201ENST00000261789 LOC100653049A0A140TA62 436 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CCDC189A1A4V9 331 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 ZMPSTE24O75844 475 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 KRT34O76011 436 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 PGAM1P18669 254 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CNTFP26441 200 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 GJA5P36382 358 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 ZNF792Q3KQV3 632 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 RABGAP1LQ5R372 815 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 HFE2Q6ZVN8 426 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CTU1Q7Z7A3 348 aaKnown RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 RNF169Q8NCN4 708 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 AGAP2Q99490 1192 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 ZNF184Q99676 751 aaPredicted RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 SNX25Q9H3E2 840 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 APOBEC2Q9Y235 224 aaKnown RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 M0QYT0 321 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 PDE5AO76074 875 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 SNAI1O95863 264 aaPredicted RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 PROCP04070 461 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 SMPD1P17405 629 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 AOC1P19801 751 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 IDH3AP50213 366 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 EPHB1P54762 984 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 USP4Q13107 963 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 DLG2Q15700 870 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 LRRC36Q1X8D7 754 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 SLC25A52Q3SY17 297 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 STRADAQ7RTN6 431 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CRYBG2Q8N1P7 616 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 PYDC1Q8WXC3 89 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 ATP2A3Q93084 1043 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CCDC124Q96CT7 223 aaKnown RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 FAM124BQ9H5Z6 455 aaPredicted RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 CAB39LQ9H9S4 337 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 PIDD1Q9HB75 910 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 ADARB2Q9NS39 739 aaKnown RBP16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 SOX13Q9UN79 622 aa16.79■□□□□ 0.28
TM9SF1-201ENST00000261789 SMIM28A0A1B0GU29 152 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 UBTFL6P0CB48 400 aaPredicted RBP16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 CD1EP15812 388 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 NCF2P19878 526 aaPredicted RBP16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 TRMT5Q32P41 509 aaKnown RBP16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 DNAL1Q4LDG9 190 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 IRGCQ6NXR0 463 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 ALKAL1Q6UXT8 129 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 CYS1Q717R9 158 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 ANLNQ9NQW6 1124 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 PIGVQ9NUD9 493 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 TXNDC16Q9P2K2 825 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 COPG2Q9UBF2 871 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 DCDC2Q9UHG0 476 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 NUP205Q92621 2012 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 HACD1B0YJ81 288 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 F8W8V4 182 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 PIRO00625 290 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 GPR32O75388 356 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 SERPINE1P05121 402 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 MLNP12872 115 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 PSEN1P49768 467 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 GRIK3Q13003 919 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 PPIL2Q13356 520 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 IZUMO2Q6UXV1 221 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 PHTF2Q8N3S3 785 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 DCLK2Q8N568 766 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 HIPK4Q8NE63 616 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 TMEM40Q8WWA1 233 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 CDCA5Q96FF9 252 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 APOL2Q9BQE5 337 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 KATNBL1Q9H079 304 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 SNX15Q9NRS6 342 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 COL1A2P08123 1366 aa16.78■□□□□ 0.28
TM9SF1-201ENST00000261789 CCDC78A2IDD5 438 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 GOLGA8TH3BQL2 631 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 OPHN1O60890 802 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 RALBP11234 206 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 IRF9Q00978 393 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 OSTM1Q86WC4 334 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 ACVR1CQ8NER5 493 aa16.77■□□□□ 0.28
TM9SF1-201ENST00000261789 APPL2Q8NEU8 664 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms