RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 NUF2Q9BZD4 464 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 PICK1Q9NRD5 415 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
LMNB1-201ENST00000261366 RPL10P27635 214 aaKnown RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 SLC5A2P31639 672 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 ADARP55265 1226 aaKnown RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 PRAMEF18Q5VWM3 479 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 TSHZ1Q6ZSZ6 1077 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 PYROXD2Q8N2H3 581 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 ZNF512Q96ME7 567 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 Q9H521 79 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 MKS1Q9NXB0 559 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 CPSF3Q9UKF6 684 aaKnown RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 FIS1Q9Y3D6 152 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 LTFP02788 710 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 CYP3A5P20815 502 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 NCAPG2Q86XI2 1143 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 SPNS2Q8IVW8 549 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 DSELQ8IZU8 1212 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 TDRD5Q8NAT2 981 aaKnown RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 CDKL2Q92772 493 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
LMNB1-201ENST00000261366 BTBD9Q96Q07 612 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 TCF7L2Q9NQB0 619 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 ANLNQ9NQW6 1124 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 DNAJC28Q9NX36 388 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 MOCS1Q9NZB8 636 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 TSPAN16Q9UKR8 245 aa16.31■□□□□ 0.2
LMNB1-201ENST00000261366 ATP9BO43861 1147 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 PENKP01210 267 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-201ENST00000261366 PTPN1P18031 435 aaKnown RBP16.3■□□□□ 0.2
LMNB1-201ENST00000261366 GLRBP48167 497 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
LMNB1-201ENST00000261366 MARVELD2Q8N4S9 558 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-201ENST00000261366 SYBUQ9NX95 663 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 GJA3Q9Y6H8 435 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 FOXD2O60548 495 aaPredicted RBP16.3■□□□□ 0.2
LMNB1-201ENST00000261366 ENDOD1O94919 500 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 PIK3R1P27986 724 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 SDC4P31431 198 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 FSCBQ5H9T9 825 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 KLHL23Q8NBE8 558 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 LPAR1Q92633 364 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 AGAP2Q99490 1192 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 SNX15Q9NRS6 342 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 RPS6KL1Q9Y6S9 549 aa16.3■□□□□ 0.2
LMNB1-201ENST00000261366 CASQ2O14958 399 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-201ENST00000261366 TNFAIP8O95379 198 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 FAM58BPP0C7Q3 252 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 NDST1P52848 882 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 XIAPP98170 497 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 CEACAM7Q14002 265 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 TRIM67Q6ZTA4 783 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 DCLK2Q8N568 766 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 SNX31Q8N9S9 440 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 CCNYQ8ND76 341 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 CLEC4CQ8WTT0 213 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 CAAP1Q9H8G2 361 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 BCLAF3A2AJT9 711 aaKnown RBP16.29■□□□□ 0.2
LMNB1-201ENST00000261366 HMGCS2P54868 508 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 SH2D4BQ5SQS7 431 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 PMF1Q6P1K2 205 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 BNC2Q6ZN30 1099 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-201ENST00000261366 TRIML2Q8N7C3 387 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 NPAS2Q99743 824 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 CDH19Q9H159 772 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 NDUFA13Q9P0J0 144 aa16.29■□□□□ 0.2
LMNB1-201ENST00000261366 MAFBQ9Y5Q3 323 aaPredicted RBP16.29■□□□□ 0.2
LMNB1-201ENST00000261366 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ATP6V1G1O75348 118 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ARSAP15289 507 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 MX2P20592 715 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 GRK2P25098 689 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 AP3M2P53677 418 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 CDK18Q07002 472 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 PPIDQ08752 370 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 CYLC2Q14093 348 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 TMEM259Q4ZIN3 620 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 FAM219BQ5XKK7 198 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 DUS1LQ6P1R4 473 aaKnown RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 CDKL3Q8IVW4 592 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 KYQ8NBH2 561 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 COLGALT1Q8NBJ5 622 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 EME1Q96AY2 570 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 LRRC39Q96DD0 335 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 FAM210AQ96ND0 272 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 FRMD8Q9BZ67 464 aaPredicted RBP16.28■□□□□ 0.2
LMNB1-201ENST00000261366 TMPRSS4Q9NRS4 437 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ADA2Q9NZK5 511 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
LMNB1-201ENST00000261366 ZNF711Q9Y462 761 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms