RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 OR6B1O95007 311 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TRUB2O95900 331 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 C1QAP02745 245 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PEX2P28328 305 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 MIPP30301 263 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 HOXA11P31270 313 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 COPAP53621 1224 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 GDF10P55107 478 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TUBB3Q13509 450 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 DPYSL3Q14195 570 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 MFSD10Q14728 455 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TRIP10Q15642 601 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 BOLA3Q53S33 107 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 RABGAP1LQ5R372 815 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 OLFML2BQ68BL8 750 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 KLHDC10Q6PID8 442 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TLK2Q86UE8 772 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 KBTBD6Q86V97 674 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 IGDCC3Q8IVU1 814 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CATSPER1Q8NEC5 780 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 ZNF696Q9H7X3 374 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 DTNAQ9Y4J8 743 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 GOLGB1Q14789 3259 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 MANSC4A6NHS7 340 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 C2CD4BA6NLJ0 364 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 HAS3O00219 553 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 MCF2LO15068 1137 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CHADO15335 359 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CST8O60676 142 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 RFPL1O75677 317 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PIAS1O75925 651 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 ENDOD1O94919 500 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CELF2O95319 508 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CYP3A5P20815 502 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PRKCHP24723 683 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PRDX6P30041 224 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 L1CAMP32004 1257 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CRHR1P34998 444 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PSEN2P49810 448 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 YWHAGP61981 247 aaKnown RBP eCLIP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 SLC25A3Q00325 362 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 DCTN2Q13561 401 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 UBAP2LQ14157 1087 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 GOLGA7BQ2TAP0 167 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PKDCCQ504Y2 493 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TXNRD3NBQ6F5E7 133 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 OR6B2Q6IFH4 312 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 FBXL19Q6PCT2 694 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 ALKAL1Q6UXT8 129 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TMC7Q7Z402 723 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CMTM5Q96DZ9 223 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 SLC4A5Q9BY07 1137 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 FAM49AQ9H0Q0 323 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 AP5M1Q9H0R1 490 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 SNTG2Q9NY99 539 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 CDH22Q9UJ99 828 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 APOBEC2Q9Y235 224 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 POMPQ9Y244 141 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 SNX9Q9Y5X1 595 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 TXNDC9O14530 226 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 PRPSAP2O60256 369 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 KPNA6O60684 536 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 KRT38O76015 456 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 TOMM70O94826 608 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 TNFAIP8O95379 198 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 CD48P09326 243 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 CDK4P11802 303 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 KCNE1P15382 129 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 RAG1P15918 1043 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 PDGFRAP16234 1089 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 IL1R2P27930 398 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 ACADSBP45954 432 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 ADARP55265 1226 aaKnown RBP11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 ADAM17P78536 824 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 LRRC36Q1X8D7 754 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 CES4AQ5XG92 561 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 TMEM110Q86TL2 294 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 RFX6Q8HWS3 928 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 UNC45BQ8IWX7 931 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 FBXW8Q8N3Y1 598 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 ARFGAP1Q8N6T3 406 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 SOCS4Q8WXH5 440 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 PTPN18Q99952 460 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 MECRQ9BV79 373 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 GDAP2Q9NXN4 497 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 PSMD13Q9UNM6 376 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 LZTS1Q9Y250 596 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 TTLL3Q9Y4R7 772 aa11.09□□□□□ -0.63
CHRNA1-201ENST00000261007 H3BNX3 289 aa11.08□□□□□ -0.64
CHRNA1-201ENST00000261007 PGM3O95394 542 aa11.08□□□□□ -0.64
CHRNA1-201ENST00000261007 RPLP2P05387 115 aaKnown RBP11.08□□□□□ -0.64
CHRNA1-201ENST00000261007 SDC4P31431 198 aa11.08□□□□□ -0.64
CHRNA1-201ENST00000261007 SERPINB6P35237 376 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms