RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 C3orf70A6NLC5 250 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 ADM5C9JUS6 153 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PPEF2O14830 753 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 MFSD11O43934 449 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ONECUT3O60422 494 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 TRIM13O60858 407 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 DNAJC6O75061 913 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 RECQL4O94761 1208 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PIGNO95427 931 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 TSHRP16473 764 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PGAM1P18669 254 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ADORA2AP29274 412 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 SERPINB8P50452 374 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PGGT1BP53609 377 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 SLC18A2Q05940 514 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 WASHC5Q12768 1159 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 CDC16Q13042 620 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 LRRC8EQ6NSJ5 796 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 LCLAT1Q6UWP7 414 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 LBX2Q6XYB7 198 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PIGZQ86VD9 579 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 IFNEQ86WN2 208 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ARHGAP18Q8N392 663 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 CERS2Q96G23 380 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ELMO2Q96JJ3 720 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PANX3Q96QZ0 392 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 TUBGCP5Q96RT8 1024 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 OMDQ99983 421 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 MMADHCQ9H3L0 296 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 EBF3Q9H4W6 596 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 NMRAL1Q9HBL8 299 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 SNX15Q9NRS6 342 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 EURLQ9NYK6 297 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 KANSL3Q9P2N6 904 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 FAF1Q9UNN5 650 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 AURKCQ9UQB9 309 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PSAT1Q9Y617 370 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 MYO18AQ92614 2054 aaKnown RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 ASB14A6NK59 587 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 E7ESA3 106 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 LIN7AO14910 233 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 PLIN3O60664 434 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 RFPL1O75677 317 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 LGALS2P05162 132 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 CYP2C8P10632 490 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 CNTFP26441 200 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PTPN7P35236 360 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ADCYAP1R1P41586 468 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 GABRB2P47870 512 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 TPD52P55327 224 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 HDAC4P56524 1084 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 STX1BP61266 288 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ROR2Q01974 943 aaKnown RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 MBTD1Q05BQ5 628 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 GRM1Q13255 1194 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 DYNC1I2Q13409 638 aaKnown RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 PDE1CQ14123 709 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 DGKDQ16760 1214 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PPP1R15BQ5SWA1 713 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 CERCAMQ5T4B2 595 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 POTEAQ6S8J7 498 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 C4orf22Q6V702 233 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 BNC2Q6ZN30 1099 aaPredicted RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 ARCQ7LC44 396 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 TTC30AQ86WT1 665 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PQLC3Q8N755 202 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ENDOVQ8N8Q3 282 aaKnown RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 OR6J1Q8NGC5 347 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 NRG4Q8WWG1 115 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 MFSD3Q96ES6 412 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 PTCD3Q96EY7 689 aaKnown RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 ZNF560Q96MR9 790 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 EPAS1Q99814 870 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 WDR83Q9BRX9 315 aaKnown RBP4.86□□□□□ -1.63
USP44-201ENST00000258499 NAT9Q9BTE0 207 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 COG4Q9H9E3 785 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 IRAK4Q9NWZ3 460 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 DTLQ9NZJ0 730 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 FETUBQ9UGM5 382 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 CDYLQ9Y232 598 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 ADGRA2Q96PE1 1338 aa4.86□□□□□ -1.63
USP44-201ENST00000258499 BTAF1O14981 1849 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 RNF103-CHMP3A0A140T963 221 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 GIPC1O14908 333 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 AHCYL1O43865 530 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 MAGEC1O60732 1142 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 CSPG5O95196 566 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 VAPBO95292 243 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 CLPTM1O96005 669 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 THRAP10827 490 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 CYP2C9P11712 490 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 COX4I1P13073 169 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 NELFEP18615 380 aaKnown RBP4.85□□□□□ -1.63
USP44-201ENST00000258499 FGFR3P22607 806 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 MPSTP25325 297 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 NR2C2P49116 596 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 TKTL1P51854 596 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 ACTR3P61158 418 aa4.85□□□□□ -1.63
USP44-201ENST00000258499 MRPS5P82675 430 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms