RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 NCEH1Q6PIU2 408 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 PIGZQ86VD9 579 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 DHX40Q8IX18 779 aaKnown RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 PLD4Q96BZ4 506 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 ULBP1Q9BZM6 244 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 EBF2Q9HAK2 575 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 SGK2Q9HBY8 427 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 DMAC2Q9NW81 257 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 FBXL12Q9NXK8 326 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 STIM2Q9P246 746 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 CYSRT1A8MQ03 144 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 TULP2O00295 520 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 VILLO15195 856 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 TBL1XO60907 577 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
DDX39A-201ENST00000242776 POLR2EP19388 210 aaKnown RBP14.35□□□□□ -0.11
DDX39A-201ENST00000242776 VAMP7P51809 220 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 RACK1P63244 317 aaKnown RBP14.35□□□□□ -0.11
DDX39A-201ENST00000242776 BNIP3Q12983 259 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 FOXR2Q6PJQ5 311 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 AHI1Q8N157 1196 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 ARHGAP18Q8N392 663 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 WFIKKN2Q8TEU8 576 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 BAP1Q92560 729 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 NIF3L1Q9GZT8 377 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 KCTD10Q9H3F6 313 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 FRMD4BQ9Y2L6 1034 aa14.35□□□□□ -0.11
DDX39A-201ENST00000242776 NYNRINQ9P2P1 1898 aaKnown RBP14.35□□□□□ -0.11
DDX39A-201ENST00000242776 TDRD6O60522 2096 aaKnown RBP14.34□□□□□ -0.11
DDX39A-201ENST00000242776 A0A1W2PPC4 97 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 E9PAM4 449 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 TK2O00142 265 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 MID1O15344 667 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 BRINP1O60477 761 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
DDX39A-201ENST00000242776 ACADVLP49748 655 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 GALCP54803 685 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 TRIP4Q15650 581 aaPredicted RBP14.34□□□□□ -0.11
DDX39A-201ENST00000242776 TPD52L1Q16890 204 aaPredicted RBP14.34□□□□□ -0.11
DDX39A-201ENST00000242776 EDRF1Q3B7T1 1238 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
DDX39A-201ENST00000242776 FAM217AQ8IXS0 508 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 ZNF276Q8N554 614 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 TMC2Q8TDI7 906 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 RNF139Q8WU17 664 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 PABPC3Q9H361 631 aaKnown RBP14.34□□□□□ -0.11
DDX39A-201ENST00000242776 CYP3A43Q9HB55 503 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 TRAF3IP3Q9Y228 551 aa14.34□□□□□ -0.11
DDX39A-201ENST00000242776 CAPN9O14815 690 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 DFNA5O60443 496 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 SIN3BO75182 1162 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
DDX39A-201ENST00000242776 ZBED1O96006 694 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 ATP5BP06576 529 aaKnown RBP14.33□□□□□ -0.12
DDX39A-201ENST00000242776 DLDP09622 509 aaKnown RBP14.33□□□□□ -0.12
DDX39A-201ENST00000242776 RPL13P26373 211 aaKnown RBP14.33□□□□□ -0.12
DDX39A-201ENST00000242776 ZBTB16Q05516 673 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 NFIL3Q16649 462 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 GOLGA7BQ2TAP0 167 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 KDM7AQ6ZMT4 941 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 GPR155Q7Z3F1 870 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 MMAAQ8IVH4 418 aaKnown RBP14.33□□□□□ -0.12
DDX39A-201ENST00000242776 SAP25Q8TEE9 199 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 OMDQ99983 421 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 SUN2Q9UH99 717 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 PCDHGA1Q9Y5H4 931 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 ZNF462Q96JM2 2506 aa14.33□□□□□ -0.12
DDX39A-201ENST00000242776 SMTNL1A8MU46 457 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 BECN2A8MW95 431 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 PIK3R2O00459 728 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 PAPSS1O43252 624 aaPredicted RBP14.32□□□□□ -0.12
DDX39A-201ENST00000242776 SDC3O75056 442 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 CD38P28907 300 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 PSMD8P48556 350 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 ZNF165P49910 485 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 STX17P56962 302 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 ST8SIA6P61647 398 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 MYL5Q02045 173 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 CFHR1Q03591 330 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 ZCWPW2Q504Y3 356 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 TAF1BQ53T94 588 aaPredicted RBP14.32□□□□□ -0.12
DDX39A-201ENST00000242776 FBXL19Q6PCT2 694 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 SLC9A9Q8IVB4 645 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 SLC4A11Q8NBS3 891 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 GOLGA1Q92805 767 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 TATDN2Q93075 761 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 SKA1Q96BD8 255 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 SERAC1Q96JX3 654 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 DNAI2Q9GZS0 605 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 RSPH9Q9H1X1 276 aaPredicted RBP14.32□□□□□ -0.12
DDX39A-201ENST00000242776 GDF3Q9NR23 364 aa14.32□□□□□ -0.12
DDX39A-201ENST00000242776 TENM4Q6N022 2769 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms