RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 SPATA13Q96N96 652 aa13.52□□□□□ -0.25
COPS7A-201ENST00000229251 CYTH2Q99418 400 aa13.52□□□□□ -0.25
COPS7A-201ENST00000229251 C17orf80Q9BSJ5 609 aa13.52□□□□□ -0.25
COPS7A-201ENST00000229251 DDIT4Q9NX09 232 aa13.52□□□□□ -0.25
COPS7A-201ENST00000229251 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.25
COPS7A-201ENST00000229251 SMG5Q9UPR3 1016 aaKnown RBP13.52□□□□□ -0.25
COPS7A-201ENST00000229251 TTC3P53804 2025 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 TCRBV7S3A2A0A539 114 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 TMEM120BA0PK00 339 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 RASA4BC9J798 803 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 I3L4J1 428 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 DCLK1O15075 740 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 PRPF4O43172 522 aaKnown RBP eCLIP13.51□□□□□ -0.25
COPS7A-201ENST00000229251 HOXA2O43364 376 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 RASA4O43374 803 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 IGLV3-25P01717 112 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 MLNP12872 115 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 BDNFP23560 247 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 STX2P32856 288 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 SERPINB6P35237 376 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 MAGEA3P43357 314 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 PITX1P78337 314 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-201ENST00000229251 ZNF33AQ06730 810 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 GPNMBQ14956 572 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 BBS9Q3SYG4 887 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 MSS51Q4VC12 460 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 VSTM1Q6UX27 236 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 EP400NLQ6ZTU2 488 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 C3orf62Q6ZUJ4 267 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 SPATA2LQ8IUW3 424 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-201ENST00000229251 ZNF317Q96PQ6 595 aaPredicted RBP13.51□□□□□ -0.25
COPS7A-201ENST00000229251 EPAS1Q99814 870 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 ABCC13Q9NSE7 274 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 TBC1D13Q9NVG8 400 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 CTNNAL1Q9UBT7 734 aa13.51□□□□□ -0.25
COPS7A-201ENST00000229251 MYO18AQ92614 2054 aaKnown RBP13.51□□□□□ -0.25
COPS7A-201ENST00000229251 MFSD11O43934 449 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 GFRA3O60609 400 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 MX2P20592 715 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 SEC24CP53992 1094 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 PAN2Q504Q3 1202 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 BRMS1LQ5PSV4 323 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 BSPRYQ5W0U4 402 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 YTHDF3Q7Z739 585 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 PYROXD2Q8N2H3 581 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 MDM1Q8TC05 714 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 FAM193BQ96PV7 902 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 WDR83Q9BRX9 315 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 OXCT2Q9BYC2 517 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 NSRP1Q9H0G5 558 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 OSBPL2Q9H1P3 480 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 RSPH14Q9UHP6 348 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 MUTYHQ9UIF7 546 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 FAM47DPA6NHR8 397 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 TRDMT1O14717 391 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 NBNO60934 754 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ITGB1P05556 798 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 APRTP07741 180 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ELK3P41970 407 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 MAGEA11P43364 429 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 TPI1P60174 286 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 GAD2Q05329 585 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 EIF4EBP2Q13542 120 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 TMED2Q15363 201 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 FAM117BQ6P1L5 589 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 LRRTM3Q86VH5 581 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ANKMY2Q8IV38 441 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 CCDC110Q8TBZ0 833 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 HASPINQ8TF76 798 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 EDAQ92838 391 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ALKBH8Q96BT7 664 aaKnown RBP13.5□□□□□ -0.25
COPS7A-201ENST00000229251 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 CLDND1Q9NY35 253 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
COPS7A-201ENST00000229251 FNDC1Q4ZHG4 1894 aaPredicted RBP13.49□□□□□ -0.25
COPS7A-201ENST00000229251 OR6C75A6NL08 312 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 H3BNC9 293 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 TNFRSF10BO14763 440 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 TRIM66O15016 1216 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 DDHD2O94830 711 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SSTR1P30872 391 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SMARCB1Q12824 385 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SMAD2Q15796 467 aaKnown RBP13.49□□□□□ -0.25
COPS7A-201ENST00000229251 ANKRD20A2Q5SQ80 823 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 ANKRD20A1Q5TYW2 823 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 ANKRD20A3Q5VUR7 823 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 FOXR1Q6PIV2 292 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms