RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 POM121L1PQ3SYA9 428 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 TTC23Q5W5X9 447 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 KLHL24Q6TFL4 600 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 SPOCD1Q6ZMY3 1216 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 MILR1Q7Z6M3 343 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 MCEMP1Q8IX19 187 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 ST13P5Q8NFI4 369 aaPredicted RBP10.77□□□□□ -0.68
TRPS1-201ENST00000220888 HELQQ8TDG4 1101 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 KLF15Q9UIH9 416 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 ADAM30Q9UKF2 790 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 STARD13Q9Y3M8 1113 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.68
TRPS1-201ENST00000220888 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.68
TRPS1-201ENST00000220888 YBX3P16989 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 MGAT5Q09328 741 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 RNF44Q7L0R7 432 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 EFCAB3Q8N7B9 438 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ANKS1AQ92625 1134 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 NMRAL1Q9HBL8 299 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ARL15Q9NXU5 204 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ZCCHC11Q5TAX3 1644 aaKnown RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3DA0A087WVF3 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3IA0A087WXS9 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3EA0A087X179 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3KA0A087X1G2 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3FA6NER0 549 aaPredicted RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3LB9A6J9 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 BAIAP3O94812 1187 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 FGRP09769 529 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 USP17L7P0C7H9 530 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3HP0C7X1 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ITGAXP20702 1163 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 SOX6P35712 828 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 SERPINB5P36952 375 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 PFKPQ01813 784 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 VAC14Q08AM6 782 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 PPIGQ13427 754 aaKnown RBP eCLIP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 PKN1Q16512 942 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 PRAMEF19Q5SWL8 479 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3GQ6DHY5 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3CQ6IPX1 549 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ZPBP2Q6X784 338 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 C7orf61Q8IZ16 206 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D3Q8IZP1 549 aaPredicted RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 OR8D1Q8WZ84 308 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 MYOCQ99972 504 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 KCNS3Q9BQ31 491 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 FAIM2Q9BWQ8 316 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 SUCOQ9UBS9 1254 aaKnown RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 MKL2Q9ULH7 1088 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ALKQ9UM73 1620 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 COX7A2P14406 83 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 PON1P27169 355 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 CDC25CP30307 473 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 PEX5P50542 639 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ZNF135P52742 658 aaPredicted RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ANTXR2P58335 489 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 RGS1Q08116 209 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ACSM2AQ08AH3 577 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ACSM2BQ68CK6 577 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 CASP12Q6UXS9 341 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 R3HCC1LQ7Z5L2 792 aaKnown RBP10.77□□□□□ -0.69
TRPS1-201ENST00000220888 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 OR56A4Q8NGH8 313 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ADAM32Q8TC27 787 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 MYLK2Q9H1R3 596 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 POPDC2Q9HBU9 364 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 ZNF232Q9UNY5 417 aa10.77□□□□□ -0.69
TRPS1-201ENST00000220888 SAC3D1A6NKF1 404 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 ISM1B1AKI9 464 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 HMGCRP04035 888 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 ASGR1P07306 291 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 PLEKP08567 350 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 DGKAP23743 735 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 RPA3P35244 121 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 PSEN1P49768 467 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 GIT2Q14161 759 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 CRYMQ14894 314 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 TTC33Q6PID6 262 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 GET4Q7L5D6 327 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 ZNF720Q7Z2F6 126 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 RIOX2Q8IUF8 465 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 CELF4Q9BZC1 486 aaKnown RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 ATP13A3Q9H7F0 1226 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 DNPEPQ9ULA0 475 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 RAD51CO43502 376 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 SLC25A12O75746 678 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 LAG3P18627 525 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 MDH1P40925 334 aaKnown RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 PARGQ86W56 976 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 HJURPQ8NCD3 748 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-201ENST00000220888 PACSIN1Q9BY11 444 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 SMIM31A0A1B0GVY4 71 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 TBL1XO60907 577 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 SMIM10L2AP0DMW4 78 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 SMIM10L2BP0DMW5 78 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 TPH1P17752 444 aa10.76□□□□□ -0.69
TRPS1-201ENST00000220888 PTPRAP18433 802 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms