RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TCF4P15884 667 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 HOXD9P28356 352 aaPredicted RBP20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 CDH4P55283 916 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 OXCT1P55809 520 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 TAS2R40P59535 323 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 RPS24P62847 133 aaKnown RBP20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 PDK2Q15119 407 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 C5orf22Q49AR2 442 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 TPRG1Q6ZUI0 275 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 CYP4V2Q6ZWL3 525 aaPredicted RBP20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 LRRC57Q8N9N7 239 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 KCTD6Q8NC69 237 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 GOLPH3Q9H4A6 298 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 DNAJC17Q9NVM6 304 aaKnown RBP20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 MRPS17Q9Y2R5 130 aaKnown RBP20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 SNX10Q9Y5X0 201 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 CAPN6Q9Y6Q1 641 aa20.82■□□□□ 0.92
RHBDD3-201ENST00000216085 A0A0C4DFX4 3053 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 H0Y626 953 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 FGF10O15520 208 aaPredicted RBP20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 LUC7L3O95232 432 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 EPHB2P29323 1055 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 CDH6P55285 790 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 HS1BP3Q53T59 392 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 C14orf80Q86SX3 495 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 CFAP52Q8N1V2 620 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 PYROXD2Q8N2H3 581 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 CARNMT1Q8N4J0 409 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 IGSF8Q969P0 613 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 TRMT1Q9NXH9 659 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 HYOU1Q9Y4L1 999 aa20.81■□□□□ 0.92
RHBDD3-201ENST00000216085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 CCDC66A2RUB6 948 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 DRGXA6NNA5 263 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 MIF4GDA9UHW6 222 aaKnown RBP20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 SOX9P48436 509 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 DGKGP49619 791 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 SGSHP51688 502 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 SIGLEC14Q08ET2 396 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 ZNF177Q13360 481 aaPredicted RBP20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 MANEALQ5VSG8 457 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 GRAMD4Q6IC98 578 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 ZNF852Q6ZMS4 543 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 CCAR2Q8N163 923 aaKnown RBP20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 UBL4BQ8N7F7 174 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 NAT16Q8N8M0 369 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 EDAQ92838 391 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 CD101Q93033 1021 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 KCTD15Q96SI1 283 aaPredicted RBP20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 P2RY13Q9BPV8 354 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 RCOR3Q9P2K3 495 aaPredicted RBP20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 PYCARDQ9ULZ3 195 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 TULP3O75386 442 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 RHOQP17081 205 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 SEMA3BQ13214 749 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 CA9Q16790 459 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 CPNE8Q86YQ8 564 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 ZNF683Q8IZ20 524 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 SIX5Q8N196 739 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 FAM3CQ92520 227 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 PNKPQ96T60 521 aa20.8■□□□□ 0.92
RHBDD3-201ENST00000216085 COL4A2P08572 1712 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 FAM72CH0Y354 149 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 KIF5CO60282 957 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 KRT1P04264 644 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 CTNNA1P35221 906 aaKnown RBP20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 HCAR3P49019 387 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 C6orf118Q5T5N4 469 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 FAM72AQ5TYM5 149 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 TXNRD3NBQ6F5E7 133 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 FAM72DQ6L9T8 149 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 FAM72BQ86X60 149 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 ETFBKMTQ8IXQ9 262 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 CALN1Q9BXU9 219 aa20.79■□□□□ 0.92
RHBDD3-201ENST00000216085 LRRD1A4D1F6 860 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 APODP05090 189 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 HOXC13P31276 330 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 MAPKAPK2P49137 400 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 GRSF1Q12849 480 aaKnown RBP eCLIP20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 RNF43Q68DV7 783 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 RFX8Q6ZV50 586 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 CIR1Q86X95 450 aaPredicted RBP20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 REXO1L1PQ8IX06 675 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 FIBINQ8TAL6 211 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 MYEOVQ96EZ4 313 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 ZNF670Q9BS34 389 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 MFSD1Q9H3U5 465 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 PCDH18Q9HCL0 1135 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 ARHGEF4Q9NR80 690 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 MPP6Q9NZW5 540 aa20.78■□□□□ 0.92
RHBDD3-201ENST00000216085 GOT1P17174 413 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 OR1E1P30953 314 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 OPRD1P41143 372 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 GAB4Q2WGN9 574 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 ANKS1BQ7Z6G8 1248 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 TFAP2DQ7Z6R9 452 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 SETD3Q86TU7 594 aaPredicted RBP20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 NT5DC3Q86UY8 548 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 VSIG1Q86XK7 387 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 KATNAL2Q8IYT4 538 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms