RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Trpv2Q9WTR1 756 aa13.07□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Wnt8bQ9WUD6 350 aa13.07□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Trpc7Q9WVC5 862 aa13.07□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Gm6657A0A1B0GRJ3 277 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Atf2P16951 487 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 IhhP97812 411 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 PrkczQ02956 592 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 4930502E18RikQ14BQ3 236 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Akap14Q3V0I7 536 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Papd5Q68ED3 633 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Tcaf3Q6QR59 914 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Jade1Q6ZPI0 834 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Eif2s1Q6ZWX6 315 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Afap1l1Q8BZI0 768 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 NcaphQ8C156 731 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Zfp263Q8CF60 680 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Kcnc4Q8R1C0 628 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Pofut2Q8VHI3 429 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Psmd8Q9CX56 353 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Fam227bQ9D518 532 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Kcnq4Q9JK97 696 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Znf711A2ANX9 761 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 BC035947B2RQY6 695 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Gm10250G3X9L6 160 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 ZfrO88532 1074 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Vti1aO89116 217 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 RarbP22605 482 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Sept4P28661 478 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Klf1P46099 358 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Faf1P54731 649 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Adcy8P97490 1249 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Phlda1Q62392 405 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 RfflQ6ZQM0 377 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Kctd12bQ8C7J6 292 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Unc45bQ8CGY6 931 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Kat14Q8CID0 779 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Utp6Q8VCY6 597 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 B4galt3Q91YY2 395 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Acbd6Q9D061 282 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Atp5hQ9DCX2 161 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 B4galt4Q9JJ04 344 aa13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Zfc3h1B2RT41 1992 aaKnown RBP13.06□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 D3Z070 196 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Apold1E9Q0X2 246 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 F6Y6L6 278 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Zfp607bG3X9H3 648 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 InaP46660 501 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Fam117bQ3U3E2 584 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Fam169aQ5XG69 665 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Pdcd4Q61823 469 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Gpatch2lQ6PE65 482 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 GnsQ8BFR4 544 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Fbxw21Q8BI38 468 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Lonp1Q8CGK3 949 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 CherpQ8CGZ0 936 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 OlahQ8R197 265 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Olfr30Q8VGD8 315 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Ugp2Q91ZJ5 508 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 DarsQ922B2 501 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Dnaaf1Q9D2H9 634 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Ift43Q9DA69 206 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Actl7bQ9QY83 418 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Cntnap4Q99P47 1310 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Lonrf1D3YY23 762 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Fgf15O35622 218 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Per2O54943 1257 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Hoxb8P09632 243 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Lmo2P25801 158 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Atp9bP98195 1146 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 VcpQ01853 806 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Ptcd3Q14C51 685 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Q3TQQ9 903 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Cyp4f37Q3V1F1 546 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Syn2Q64332 586 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Q6DFW0 481 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Arhgap28Q8BN58 729 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 H2-Q4Q8HWB2 354 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 OafQ8QZR4 282 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Nup85Q8R480 656 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Olfr1494Q8VGP8 315 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 FcrlaQ920A9 352 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Kdelr1Q99JH8 212 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Snf8Q9CZ28 258 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 TarsQ9D0R2 722 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Slamf8Q9D3G2 278 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Rgs1Q9JL25 209 aa13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Ep400Q8CHI8 3072 aaKnown RBP13.05□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Gm5145F8VQ88 278 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Zfp715G3X9T1 886 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Stt3aP46978 705 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Nat3P50296 290 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Uchl4P58321 233 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Arpc4P59999 168 aaKnown RBP13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Rab34Q64008 259 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Scube3Q66PY1 993 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Ssxb5Q6XAS2 159 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Acap2Q6ZQK5 770 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Catsper3Q80W99 395 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Taf5Q8C092 801 aa13.04□□□□□ -0.32
Prpf40a-206ENSMUST00000209364 Dmtf1Q8CE22 761 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms