RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 LipgQ9WVG5 500 aa11.28□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Fer1l4A3KGK3 1992 aa11.28□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Shroom3Q9QXN0 1986 aa11.28□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Scn8aQ9WTU3 1978 aa11.28□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Plxna2P70207 1894 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Gm3173A6NAS3 172 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Gm28042B7ZCM9 1014 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 5730507C01RikJ3QPX0 416 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Cdkn1cP49919 348 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Dsg1aQ61495 1057 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Clec16aQ80U30 1036 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Klf8Q8BLM0 355 aaKnown RBP11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Gnl3Q8CI11 538 aaKnown RBP11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Rpp25Q91WE3 199 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 TardbpQ921F2 414 aaKnown RBP11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 SrrtQ99MR6 875 aaKnown RBP11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Serpinb12Q9D7P9 423 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Mrpl17Q9D8P4 176 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Dkc1Q9ESX5 509 aaKnown RBP11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Gm11983V9GXS8 105 aa11.27□□□□□ -0.6
Ccdc60-202ENSMUST00000086483 Abhd12bG3UZN6 359 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gm3415J3QMS8 315 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Arg2O08691 354 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Rrm1P07742 792 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Krt13P08730 437 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Mthfd2P18155 350 aaKnown RBP11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Opa1P58281 960 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ppp3caP63328 521 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Pstpip1P97814 415 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 AxlQ00993 888 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Sh3bp2Q06649 559 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Prss38Q3UKY7 322 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Hspb6Q5EBG6 162 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gcnt3Q5JCT0 437 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Olfr213Q7TS32 327 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 AsphQ8BSY0 741 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Fam221bQ8C627 487 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 CbsQ91WT9 561 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Msantd3Q9CR78 275 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gm3404Q9D506 307 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 NbnQ9R207 751 aa11.27□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Alms1Q8K4E0 3251 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Rfx8D3YU81 596 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gm3488M0QW81 238 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Sept7O55131 436 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gna14P30677 355 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Fam183bQ5NC57 135 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Elavl3Q60900 367 aaKnown RBP11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Zfyve1Q810J8 777 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Tmco3Q8BH01 678 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Phactr3Q8BYK5 558 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Dennd1aQ8K382 1016 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 AdigQ8R400 80 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ube2sQ921J4 223 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Brms1Q99N20 246 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Vkorc1Q9CRC0 161 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ssr1Q9CY50 286 aaKnown RBP11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Trmt10bQ9D075 318 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 D930007J09RikQ9D2K6 131 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 GOLGA7BQ9D428 167 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Q9D937 123 aaKnown RBP11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 DexiQ9WUQ7 95 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Fam81bA0A140LI28 432 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ttc38A3KMP2 465 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gm13271B1AYH9 182 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gm10800D3Z496 220 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Acot1O55137 419 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 AfpP02772 605 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Wnt1P04426 370 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 CskP41241 450 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ube2hP62257 183 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gpr143P70259 405 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Kcnb1Q03717 857 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Ect2Q07139 913 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Lrch2Q3UMG5 773 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Kif26bQ7TNC6 2112 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Exoc3l1Q8BI71 739 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Pnpla2Q8BJ56 486 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 C5ar2Q8BW93 344 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 DrgxQ8BYH0 263 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Snrnp27Q8K194 155 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Dkk4Q8VEJ3 221 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Snrnp25Q8VIK1 123 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Pcdhb17Q91VD8 799 aa11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Akap8lQ9R0L7 642 aaKnown RBP11.26□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Gm8113E0CXS8 587 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Vmn2r94E9PZK8 818 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Nthl1O35980 300 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Atxn1lP0C7T6 687 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Itga11P61622 1188 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Tle3Q08122 772 aaKnown RBP11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 4930438A08RikQ5SPH3 536 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Hs3st2Q673U1 367 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 DgkbQ6NS52 802 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 CtifQ6PEE2 600 aaKnown RBP11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Tmem184bQ8BG09 407 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 MdficQ8BX65 247 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Mtmr6Q8VE11 617 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Tgs1Q923W1 853 aa11.25□□□□□ -0.61
Ccdc60-202ENSMUST00000086483 Rnf135Q9CWS1 417 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms