RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Pros1Q08761 675 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gpatch4Q3TFK5 415 aaKnown RBP9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Arhgap17Q3UIA2 846 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 BC051142Q3V0M8 400 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mep1bQ61847 704 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Stk35Q80ZW0 539 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ablim2Q8BL65 612 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cwf19l1Q8CI33 537 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zmynd11Q8R5C8 602 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Taf5lQ91WQ5 589 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cd209dQ91ZW8 237 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fuca2Q99KR8 461 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Use1Q9CQ56 270 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ogfod3Q9D136 315 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Exoc2Q9D4H1 924 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gpr45Q9EQQ4 373 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Trpc5Q9QX29 975 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ddx39bQ9Z1N5 428 aaKnown RBP9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 PappaQ8R4K8 1624 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Aox2Q5SGK3 1345 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm43951A0A0N4SUT6 962 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ripor3A1L3T7 938 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Btbd35f28A2CFD5 498 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ccdc175E9PVB3 822 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pibf1E9Q6K3 756 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Btbd35f30J3QML3 498 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dnajb5O89114 348 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Slc4a1P04919 929 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fv4P11370 679 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 IapP24822 559 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pabpc1P29341 636 aaKnown RBP9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ephb4P54761 987 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Slc12a2P55012 1205 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Itga11P61622 1188 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfm4Q3UZZ4 505 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ctc1Q5SUQ9 1212 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 FcgrtQ61559 365 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Klhl14Q69ZK5 630 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gpr135Q7TQP2 457 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Grik4Q8BMF5 956 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zcchc3Q8BPK2 400 aaKnown RBP9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nlrp4bQ8C6J9 863 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Parp9Q8CAS9 866 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ulbp1Q8HWA3 334 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Degs2Q8R2F2 323 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Epm2aip1Q8VEH5 606 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pcdhgb1Q91XX8 918 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nek8Q91ZR4 698 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pcyt2Q922E4 404 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Sec23bQ9D662 767 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tbx20Q9ES03 445 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 ErmapQ9JLN5 566 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nphs1Q9QZS7 1256 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vnn1Q9Z0K8 512 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 AtrnQ9WU60 1428 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Igsf1Q7TQA1 1317 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Map7d3A2AEY4 876 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vmn1r31L7N2F1 303 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 MaffO54791 156 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mpp3O88910 568 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 RcvrnP34057 202 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Slc7a10P63115 530 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 G2e3Q5RJY2 716 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 PterQ60866 349 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pou4f3Q63955 338 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 PrcpQ7TMR0 491 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 AdalQ80SY6 360 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Sestd1Q80UK0 696 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fam234bQ8BYI8 624 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dennd2aQ8C4S8 1000 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Trim32Q8CH72 655 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Golm1Q91XA2 393 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Socs4Q91ZA6 436 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vangl2Q91ZD4 521 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dpp3Q99KK7 738 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Abcf2Q99LE6 628 aaKnown RBP9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Spz1Q99MY0 378 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Med7Q9CZB6 233 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Alg14Q9D081 217 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 OxsmQ9D404 459 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 1700013H16RikQ9DAC5 291 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Aldh7a1Q9DBF1 539 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Uba7Q9DBK7 977 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 NfkbiaQ9Z1E3 314 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 A0A1Y7VIU7 259 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr1328B1ARV2 313 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Chst13D3Z6E3 336 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm16506F7ANP4 213 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm21750L7N228 499 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm17078M0QW51 211 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm17174M0QWQ9 212 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zmat3O54836 290 aaKnown RBP9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hmx3P42581 356 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 VegfbP49766 207 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Sumo1P63166 101 aaKnown RBP9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 SpertQ32MG2 446 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dhrs11Q3U0B3 260 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ankrd27Q3UMR0 1048 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mfhas1Q3V1N1 1048 aa9.32□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zfp36l3Q5ISE2 725 aa9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms