RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Pold2O35654 469 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pim1P06803 397 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 DmpkP54265 631 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tubgcp3P58854 905 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sycp3P70281 254 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 NxnP97346 435 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Kcna4Q61423 654 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 DstykQ6XUX1 927 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ddx55Q6ZPL9 600 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fam204aQ8C6C7 236 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pgm2l1Q8CAA7 621 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ccdc63Q8CDV6 558 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tbc1d13Q8R3D1 400 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cdc26Q99JP4 85 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 C1qtnf1Q9QXP7 281 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cntnap5aQ0V8T9 1304 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 SisF8VQM5 1818 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Slc4a11A2AJN7 862 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm15155B1B034 138 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm4302E9PX25 294 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Vmn2r100E9QAZ9 850 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cyp4f17G3UW78 524 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Prl3b1P09586 222 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mpp1P70290 466 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Irf6P97431 467 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Krt26Q3TRJ4 462 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mettl17Q3U2U7 461 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ahcyl2Q68FL4 613 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Armc12Q80X86 340 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tmem198Q8BG75 360 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ccdc184Q8BMK5 191 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Clic5Q8BXK9 251 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Slc15a5Q8CBB2 566 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Acad10Q8K370 1069 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Slc25a3Q8VEM8 357 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pcdha6Q91Y14 946 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cyp4f16Q99N17 524 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Serpina1fQ9DCQ7 411 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ndufa13Q9ERS2 144 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ddx21Q9JIK5 851 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Noa1Q9JJG9 693 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 NumbQ9QZS3 653 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cpxm1Q9Z100 722 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sf3b1Q99NB9 1304 aaKnown RBP10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 C1qbpO35658 278 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Akap10O88845 662 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Abcb1bP06795 1276 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mxd1P50538 227 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tmem165P52875 323 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Emilin3P59900 758 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Morf4l1P60762 362 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ag2Q3UPL5 249 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Usp8Q80U87 1080 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Xylt1Q811B1 953 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cgrrf1Q8BMJ7 332 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Brat1Q8C3R1 822 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fbxo33Q8VE08 562 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pcdha1Q91Y21 948 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Krcc1Q99JT5 256 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Trim8Q99PJ2 551 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Q9D1Z2 194 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 IcmtQ9EQK7 283 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Jph2Q9ET78 696 aa10.02□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm6657A0A1B0GRJ3 277 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Dhx35A2ACQ1 703 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Vmn2r72D3Z4N8 856 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 2610028H24RikG5E8K1 270 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Krt6aP50446 553 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Plk2P53351 682 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Arl14Q3SXC5 192 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 CblbQ3TTA7 982 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pcnx4Q3UVY5 1174 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Slc20a1Q61609 681 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Znf148Q61624 794 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ErfeQ6PGN1 340 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Catsper3Q80W99 395 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Aste1Q8BIR2 672 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 TbcdQ8BYA0 1196 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pcdhb7Q8CDY9 829 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Dlk2Q8K1E3 382 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Plbd1Q8VCI0 550 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Nsmce2Q91VT1 247 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Psmd8Q9CX56 353 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Efhc1Q9D9T8 648 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 MrgbpQ9DAT2 204 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Strn3Q9ERG2 796 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Angptl2Q9R045 493 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Zswim8Q3UHH1 1832 aaKnown RBP10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Gm21731A0A286YDE9 180 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 ZxdbA2CE44 873 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 A630010A05RikA9C473 232 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Acp4D3YTS9 425 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Vmn2r19G5E8G4 854 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Sptlc1O35704 473 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Cbx2P30658 519 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 UtyP79457 1212 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Vps45P97390 570 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Lrrc74bQ14BP6 391 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Myo1gQ5SUA5 1024 aa10.02□□□□□ -0.81
Ccdc40-202ENSMUST00000053440 Pde1aQ61481 565 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms