RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Afg3l1Q920A7 789 aaKnown RBP8.48□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ttc33Q9D6K7 262 aa8.48□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tspan17Q9D7W4 270 aa8.48□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tagln3Q9R1Q8 199 aa8.48□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Taf1Q80UV9 1891 aa8.48□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gm27029A2A4P4 543 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Atp8b4A2ANX3 1194 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pramef17A2ASJ1 475 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gbp4A4UUI3 631 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Adamts6D3Z1A5 1117 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Apold1E9Q0X2 246 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Klf6O08584 283 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PrkacaP05132 351 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Serpinh1P19324 417 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Sesn2P58043 480 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Npr3P70180 536 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Atf4Q06507 349 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Serpina6Q06770 397 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Lrrc74bQ14BP6 391 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Nxpe4Q52KP5 543 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 1810065E05RikQ5NC41 235 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Galnt7Q80VA0 657 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tgm6Q8BM11 706 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Slc7a14Q8BXR1 771 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Dhx32Q8BZS9 744 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Adgra1Q8C4G9 578 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ppp4r1Q8K2V1 951 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 CmasQ99KK2 432 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 4930513O06RikQ9D549 161 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Nek6Q9ES70 313 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 HephQ9Z0Z4 1157 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Fam171a2A2A699 822 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Mageb4A2A9R3 556 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trim12cD3Z3L3 497 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Olfr600E9PUN7 314 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Foxm1O08696 760 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Hcn2O88703 863 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PpargP37238 505 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Hsd11b2P51661 386 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 AdslP54822 484 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 YwhaeP62259 255 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Polr1bP70700 1135 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Kmt5aQ2YDW7 349 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Q3UE31 404 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trmt10cQ3UFY8 414 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Eml4Q3UMY5 988 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Znf507Q6ZPY5 941 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Wrap53Q8VC51 532 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Cbx7Q8VDS3 158 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Emc3Q99KI3 261 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Rassf3Q99P51 232 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Timm22Q9CQ85 194 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Serpinb9bQ9DAV6 377 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Scyl1Q9EQC5 806 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Clca3bE9PUL3 1044 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Olfr220E9Q050 325 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 F6Y6L6 278 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tnk2O54967 1055 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ap1g1P22892 822 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tac1P41539 130 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Slc1a2P43006 572 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 CiitaP79621 1155 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Nsun2Q1HFZ0 757 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Znf746Q3U133 652 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Znf185Q62394 352 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 2700097O09RikQ6PGK3 301 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Carns1Q6ZPS2 827 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tas2r102Q7M717 329 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gramd1bQ80TI0 738 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Suz12Q80U70 741 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Fads6Q80UG1 342 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Psmd11Q8BG32 422 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Lyve1Q8BHC0 318 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Kat14Q8CID0 779 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Alg9Q8VDI9 611 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trpv6Q91WD2 767 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Cyp4f15Q99N18 534 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pfdn1Q9CWM4 122 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trim39Q9ESN2 488 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 NumbQ9QZS3 653 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Top3bQ9Z321 862 aaKnown RBP8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ly75Q60767 1723 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ubr3Q5U430 1889 aa8.47□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Dpy19l4A2AJQ3 722 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 FancfE9Q5Z5 343 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Ptar1E9QAB6 424 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 H2-M9O19442 342 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Kcnj8P97794 424 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pi4k2aQ2TBE6 479 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Dtx3lQ3UIR3 748 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Wdr18Q4VBE8 431 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tom1l2Q5SRX1 507 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Myl6Q60605 151 aaKnown RBP8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 ProcrQ64695 242 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Taf5Q8C092 801 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PigwQ8C398 503 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Kctd12bQ8C7J6 292 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Brd8Q8R3B7 951 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Smyd2Q8R5A0 433 aa8.46□□□□□ -1.05
Cdc40-201ENSMUST00000044166 TfQ921I1 697 aa8.46□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms