RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 HpgdQ8VCC1 269 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pqbp1Q91VJ5 263 aaKnown RBP10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pla2g12bQ99P27 195 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cep72Q9D3R3 646 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Actrt1Q9D9J3 376 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cyb561d2Q9WUE3 222 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 H2-AaP01910 256 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 TubP50586 505 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Serpina6Q06770 397 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mgat3Q10470 538 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 SyncripQ7TMK9 623 aaKnown RBP10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Dsg1bQ7TSF1 1060 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mief1Q8BGV8 463 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Btnl9Q8BJE2 536 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Kctd2Q8CEZ0 266 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cog2Q921L5 731 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mzt2Q9CQ25 159 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Khdc3Q9CWU5 440 aa10.04□□□□□ -0.8
Syne1-201ENSMUST00000041639 Grm6Q5NCH9 871 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Klra8Q60682 266 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 PhgdhQ61753 533 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 PostnQ62009 838 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gpr150Q8BL07 427 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Hus1Q8BQY8 280 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Angel1Q8VCU0 667 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Smap1Q91VZ6 440 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pacsin3Q99JB8 424 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 SncaipQ99ME3 962 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 CenpsQ9D084 142 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tmem79Q9D709 391 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Dyrk1bQ9Z188 629 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Zbed6D2EAC2 980 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cd36Q08857 472 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rtkn2Q14B46 604 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Plekhf1Q3TB82 279 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 DcstampQ7TNJ0 470 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Hmgxb4Q80Y32 594 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Parp9Q8CAS9 866 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mapre2Q8R001 326 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Sh3glb2Q8R3V5 400 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 ClyblQ8R4N0 338 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Fubp1Q91WJ8 651 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vps35Q9EQH3 796 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pitpnm2Q6ZPQ6 1335 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Dip2cE9PWR4 1557 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vmn2r38G3UYA8 861 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vmn2r33K7N705 861 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Vmn2r44L7N2E1 861 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Surf2P09926 257 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mark4Q8CIP4 752 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pkn3Q8K045 878 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Lrit1Q8K099 624 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mdc1Q5PSV9 1707 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gm44G3UW88 330 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pold2O35654 469 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Aldh3a1P47739 453 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tmem165P52875 323 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Glt6d1Q2NKH9 311 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Pnpla5Q32LZ8 432 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Krt76Q3UV17 594 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gm11437Q5QR91 290 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rps6ka6Q7TPS0 764 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 4931406P16RikQ8C5X1 1059 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rab36Q8CAM5 267 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Batf3Q9D275 118 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Top3bQ9Z321 862 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Scgb2b21A0A087WQA9 112 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 CrnnD3YUU6 520 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Mboat4P0C7A3 435 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 InaP46660 501 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Zfp560Q3URI6 754 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Senp5Q6NXL6 749 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 RadxQ8C779 850 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Q8CD60 292 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Acad9Q8JZN5 625 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 RorbQ8R1B8 470 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Kdelr1Q99JH8 212 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Asb11Q9CQ31 323 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Oxct1Q9D0K2 520 aaKnown RBP10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gsdmdc1Q9D8T2 487 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Capn15Q9JLG8 1095 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tmem115Q9WUH1 350 aa10.03□□□□□ -0.8
Syne1-201ENSMUST00000041639 Zfp990B1AVN5 605 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 H2-Eb1P04230 264 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tbc1d10aP58802 500 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Cdh6P97326 790 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Neurl1bQ0MW30 546 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Ntrk1Q3UFB7 799 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Rcsd1Q3UZA1 412 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Sgo2Q7TSY8 1164 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Bhlhe22Q8C6A8 355 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 HnrnplQ8R081 586 aaKnown RBP10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Slc13a3Q91Y63 600 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tfr2Q9JKX3 798 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Gm5114W4VSN8 858 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Slc6a21A0A1B0GSD2 748 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Trmt1lA2RSY6 728 aaKnown RBP10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 PrkcdP28867 674 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Efr3aQ8BG67 819 aa10.02□□□□□ -0.8
Syne1-201ENSMUST00000041639 Tbl3Q8C4J7 801 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms