RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Trim12aQ99PQ1 284 aa8.23□□□□□ -1.09
Ssr3-201ENSMUST00000029414 LrgukQ9D5S7 820 aa8.23□□□□□ -1.09
Ssr3-201ENSMUST00000029414 CtsrQ9JIA9 334 aa8.23□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Golga5Q9QYE6 729 aa8.23□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Ptgdr2Q9Z2J6 382 aa8.23□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Plce1Q8K4S1 2282 aa8.23□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Igkv6-29A0A0G2JEI6 115 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Ajm1A2AJA9 974 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup10A2BIN1 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup14A2CEK7 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup19A9C497 187 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup15A9R9W0 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup17B5X0G2 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Kctd18E0CZ26 429 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup8E9PVW0 235 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gm6588E9Q3K0 461 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup7E9QA79 235 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gm10378F6XQQ1 160 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup6P02762 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup1P11588 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mup2P11589 180 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Ptger1P35375 405 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Pbx1P41778 430 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 IduaP48441 634 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mxi1P50540 228 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Smarcad1Q04692 1021 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Rnf113a2Q14B01 337 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Prss48Q14B25 312 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Osgin2Q3TEE9 550 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Defb28Q3V2L0 89 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Rnf215Q5SPX3 379 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Tpgs2Q66JT5 296 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Q66JV7 365 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Znf728Q6P5C7 752 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 TifaQ793I8 184 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Olfr213Q7TS32 327 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 C8bQ8BH35 589 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Bicdl2Q8CHW5 507 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Acsl5Q8JZR0 683 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Vsx1Q91V10 363 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Pcdha7Q91Y13 937 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Prc1Q99K43 603 aaKnown RBP8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gtf2ird2Q99NI3 936 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Hddc3Q9D114 179 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Q9D1Z2 194 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mzb1Q9D8I1 188 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Dcaf6Q9DC22 876 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mapk13Q9Z1B7 366 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gfpt2Q9Z2Z9 682 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gm5415E9PXF3 478 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Bnc1O35914 961 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Nr3c1P06537 783 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Sox5P35710 763 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Lefty2P57785 368 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 HmmrQ00547 794 aaKnown RBP8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Taf3Q5HZG4 932 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 PterQ60866 349 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Shc3Q61120 474 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Stard3Q61542 446 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Olfr855Q7TRF8 312 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Nup54Q8BTS4 510 aaKnown RBP8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Hook3Q8BUK6 718 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 ClasrpQ8CFC7 668 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Mcoln2Q8K595 566 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 TxlnbQ8VBT1 685 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Pcdha3Q91Y16 942 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Prmt1Q9JIF0 371 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Bag6Q9Z1R2 1154 aaKnown RBP8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gria3Q9Z2W9 888 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 TomtA1Y9I9 258 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Znf518bB2RRE4 1077 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Gabrg2P22723 474 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 RdxP26043 583 aaKnown RBP8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Sdr16c6Q05A13 316 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 BC051142Q3V0M8 400 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Ephx3Q3V1F8 367 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Cfhr2Q4LDF6 332 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Ttf2Q5NC05 1138 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Sh3gl3Q62421 347 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Nr6a1Q64249 495 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Q6PD19 689 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Efr3bQ6ZQ18 817 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Rps6ka6Q7TPS0 764 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Best2Q8BGM5 508 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 C5ar2Q8BW93 344 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Apbb3Q8R1C9 486 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Oas1dQ8VI95 361 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Phf6Q9D4J7 364 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Oser1Q9D722 291 aa8.22□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Zscan5bB2RTN3 468 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Kif3cO35066 796 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Kcnu1O54982 1121 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Myo1aO88329 1043 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 GmnnO88513 206 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Cuzd1P70412 606 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Uba1Q02053 1058 aaKnown RBP8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Ttc39dQ0VF76 604 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Spout1Q3UHX9 385 aaKnown RBP8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Dzip1lQ499E4 774 aa8.21□□□□□ -1.09
Ssr3-201ENSMUST00000029414 Cox14Q8BH51 57 aa8.21□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms