RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 B020004J07RikQ3UTC0 476 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fbxw11Q5SRY7 542 aaKnown RBP8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Kpna1Q60960 538 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Zfp91Q62511 572 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gabbr2Q80T41 940 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Trim62Q80V85 475 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Abraxas1Q8BPZ8 407 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ccdc68Q8BVC4 333 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ttc24Q8BYG0 334 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gsdmc3Q8CB12 480 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 NaprtQ8CC86 538 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PygbQ8CI94 843 aaKnown RBP8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Rps6kl1Q8R2S1 544 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Plekha4Q8VC98 588 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 ChiaQ91XA9 473 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 CoprsQ9CQ13 173 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 ArskQ9D2L1 553 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Pard6bQ9JK83 371 aa8.03□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Rtl9Q32KG4 1339 aa8.02□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Znf318Q99PP2 2237 aa8.02□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 1700001O22RikA2APZ1 375 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Vmn2r72D3Z4N8 856 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Olfr414E9Q5P8 317 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ctbp1O88712 441 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Cd72P21855 354 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ripk2P58801 539 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Fam47cQ14BE7 430 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Cldn11Q60771 207 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Atp2a3Q64518 1038 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Exoc3l4Q6DIA2 721 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Srrm3Q80WV7 648 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Npas4Q8BGD7 802 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Spdye4bQ8CDE8 236 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Hmgcll1Q8JZS7 343 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Tmem82Q8R115 356 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Eif3hQ91WK2 352 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 DeraQ91YP3 318 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 TfQ921I1 697 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Armc9Q9D2I5 817 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 IkbipQ9DBZ1 373 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Cog8Q9JJA2 640 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Mpp5Q9JLB2 675 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Rnf4Q9QZS2 194 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Trpm7Q923J1 1863 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Zscan5bB2RTN3 468 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Srpk1O70551 648 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Pgk1P09411 417 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 MipP51180 263 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ccna2P51943 422 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Usp46P62069 366 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Hrh2P97292 397 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ccdc61Q3UJV1 511 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 RbfaQ6P3B9 350 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Zmym6Q8BS54 1249 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Zfp120Q8BZW4 436 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Zfp62Q8C827 914 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 SarafQ8R3Q0 334 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Orc3Q9JK30 715 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ccr10Q9JL21 362 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Vmn2r25W4VSP2 855 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Zfp626A0A0U1RQ84 676 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Dthd1E9PZX1 795 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 PtproE9Q612 1226 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Pold2O35654 469 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ap3d1O54774 1199 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Tnfaip1O70479 316 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Rpl10aP53026 217 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 GaltQ03249 379 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Cpne7Q0VE82 557 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Gpd1lQ3ULJ0 351 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 SkiQ60698 725 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Q80WR5 230 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Hmgxb4Q80Y32 594 aaKnown RBP8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Klhl38Q8BSF5 581 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ipo11Q8K2V6 975 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Pde2aQ922S4 916 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Cybrd1Q925G2 290 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Atad3Q925I1 591 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Rfc5Q9D0F6 339 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Dusp6Q9DBB1 381 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Msh5Q9QUM7 833 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Rps6ka2Q9WUT3 733 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Tle2Q9WVB2 767 aa8.02□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Mroh7A2AVR2 1279 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 DgkdE9PUQ8 1220 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Cyp4f17G3UW78 524 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Olfr611K7N609 323 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Olfr612L7N462 323 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Rpl21O09167 160 aaKnown RBP8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 PdgfrbP05622 1098 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Pim1P06803 397 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Gpr25P0C5I1 358 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 RargP18911 458 aaKnown RBP8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Plk2P53351 682 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Ptprn2P80560 1001 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Adcy6Q01341 1165 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Igsf9Q05BQ1 1179 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Zbtb14Q08376 449 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Slc17a7Q3TXX4 560 aa8.01□□□□□ -1.13
Ccdc39-201ENSMUST00000029222 Trmt10cQ3UFY8 414 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms