RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Qsox1Q8BND5 748 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Bmt2Q8BXK4 403 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ablim1Q8K4G5 861 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Atp13a1Q9EPE9 1200 aaKnown RBP16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Plod3Q9R0E1 741 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Arhgef10Q8C033 1345 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 AmacrO09174 381 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Agap2Q3UHD9 1186 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pcnx4Q3UVY5 1174 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Rcsd1Q3UZA1 412 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Cfhr2Q4LDF6 332 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Stxbp5lQ5DQR4 1185 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Adgre1Q61549 931 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Htr1aQ64264 421 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 LppQ8BFW7 613 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Upb1Q8VC97 393 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Trps1Q925H1 1281 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Lrrc71Q9D3W5 558 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tspan17Q9D7W4 270 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Neu2Q9JMH3 379 aa16.6■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dhx35A2ACQ1 703 aaKnown RBP16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gm10721J3QPJ9 223 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ptger1P35375 405 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Usp46P62069 366 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Mpp1P70290 466 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ext2P70428 718 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Galnt10Q6P9S7 603 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ptk7Q8BKG3 1062 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Clasp2Q8BRT1 1286 aaKnown RBP16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pcdhb7Q8CDY9 829 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pcdhb18Q91Y02 792 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Aldh1b1Q9CZS1 519 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Elp3Q9CZX0 547 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Plin3Q9DBG5 437 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Abcb9Q9JJ59 762 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Rad51ap2G3UW63 976 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dsg3O35902 993 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Camk4P08414 469 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Crhr1P35347 415 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 GsrP47791 500 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 PhgdhQ61753 533 aaKnown RBP16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ccdc154Q6RUT8 657 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 SybuQ8BHS8 665 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Cops7bQ8BV13 264 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Kctd12bQ8C7J6 292 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 CopaQ8CIE6 1224 aaKnown RBP16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Syne4Q8CII8 388 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Acad10Q8K370 1069 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fam192aQ91WE2 254 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Catsper1Q91ZR5 686 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fam212aQ9CX62 282 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 MajinQ9D992 256 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ngly1Q9JI78 651 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fbxo16Q9QZM9 334 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Trpv2Q9WTR1 756 aa16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Nup205A0A0J9YUD5 2061 aaKnown RBP16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Lama2Q60675 3118 aaKnown RBP16.59■□□□□ 0.25
Trim28-201ENSMUST00000005705 Mindy4b-psA0A1W2P7H6 457 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fam155bA2BDP1 471 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Eno3P21550 434 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Il6raP22272 460 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Nr2c2P49117 596 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 PgrQ00175 926 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 PighQ5M9N4 188 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Atg9bQ6EBV9 922 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Smndc1Q8BGT7 238 aaKnown RBP16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Slc9a4Q8BUE1 797 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Q8BZE1 841 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tmem82Q8R115 356 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pkp2Q9CQ73 795 aaKnown RBP16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Arpc2Q9CVB6 300 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Commd8Q9CZG3 183 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 MtrexQ9CZU3 1040 aaKnown RBP16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ndufa13Q9ERS2 144 aa16.58■□□□□ 0.25
Trim28-201ENSMUST00000005705 Olfr271-ps1A0A1L1SQH2 283 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Inpp5aE9QAS7 422 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tnfrsf11bO08712 401 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Osbpl6Q8BXR9 959 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Unc45bQ8CGY6 931 aaKnown RBP16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 OscarQ8VBT3 265 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Znf24Q91VN1 368 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Sntg2Q925E0 539 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Mov10l1Q99MV5 1187 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Eef1akmt2Q9D853 244 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Prl2a1Q9JHK0 228 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Slc26a3Q9WVC8 757 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 BpgmP15327 259 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tubgcp3P58854 905 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Pdss1Q33DR2 409 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 FcgrtQ61559 365 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 ProcrQ64695 242 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ccdc151Q8BSN3 593 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 AadacQ99PG0 398 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 CabyrQ9D424 453 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 PignQ9R1S3 931 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Tbk1Q9WUN2 729 aa16.58■□□□□ 0.24
Trim28-201ENSMUST00000005705 Znf318Q99PP2 2237 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Gm44511A0A0N4SW10 223 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Ttc30a2A2AKQ8 664 aa16.57■□□□□ 0.24
Trim28-201ENSMUST00000005705 Fibcd1A2AV25 459 aa16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms