RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 OSBPL1AQ9BXW6 950 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 CAB39LQ9H9S4 337 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 XAB2Q9HCS7 855 aaKnown RBP17.31■□□□□ 0.36
PHGDH-223ENST00000641597 TMEM216Q9P0N5 145 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SMNDC1O75940 238 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHGDH-223ENST00000641597 PSMG1O95456 288 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 C6orf222P0C671 652 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-223ENST00000641597 SETSIPP0DME0 302 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 SMIM10L2AP0DMW4 78 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 SMIM10L2BP0DMW5 78 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 FGF3P11487 239 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-223ENST00000641597 ARL4AP40617 200 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 MATKP42679 507 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 NIPAL4Q0D2K0 466 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 KRT72Q14CN4 511 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 DCAF4L1Q3SXM0 396 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 PAQR9Q6ZVX9 377 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 PLD6Q8N2A8 252 aaKnown RBP17.3■□□□□ 0.36
PHGDH-223ENST00000641597 DNAJC9Q8WXX5 260 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 LRRC39Q96DD0 335 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 KCNK16Q96T55 309 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-223ENST00000641597 PLXNB2O15031 1838 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 BTBD19C9JJ37 291 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 CYP2C9P11712 490 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 KYAT1Q16773 422 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 MUM1Q2TAK8 710 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 TEDDM1Q5T9Z0 273 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 ATG16L1Q676U5 607 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 GPRIN1Q7Z2K8 1008 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 NT5DC4Q86YG4 428 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 LRRC52Q8N7C0 313 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 APPL2Q8NEU8 664 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 NPLOC4Q8TAT6 608 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 GORASP1Q9BQQ3 440 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 RHOBTB2Q9BYZ6 727 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 FRMD8Q9BZ67 464 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-223ENST00000641597 SLC24A3Q9HC58 644 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 UBP1Q9NZI7 540 aa17.3■□□□□ 0.36
PHGDH-223ENST00000641597 SDR42E2A6NKP2 422 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 TREHO43280 583 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 USP1O94782 785 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 ITGA2BP08514 1039 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 MAP3K7CLP57077 242 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 SLC25A3Q00325 362 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 SNAPC2Q13487 334 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 BLMHQ13867 455 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 PCLAFQ15004 111 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 ZNF410Q86VK4 478 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 UNC93AQ86WB7 457 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 CRYBG2Q8N1P7 616 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 B3GALNT2Q8NCR0 500 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 CCDC106Q9BWC9 280 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 SHROOM3Q8TF72 1996 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 DICER1Q9UPY3 1922 aaKnown RBP17.29■□□□□ 0.36
PHGDH-223ENST00000641597 COL1A2P08123 1366 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 ZMPSTE24O75844 475 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 DARSP14868 501 aaKnown RBP17.29■□□□□ 0.36
PHGDH-223ENST00000641597 NR2C2P49116 596 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 PDE1BQ01064 536 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 DGKDQ16760 1214 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 SLC25A52Q3SY17 297 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 DUSP28Q4G0W2 176 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 PID1Q7Z2X4 250 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 TTC39CQ8N584 583 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 NPWQ8N729 165 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 SCG3Q8WXD2 468 aaKnown RBP17.29■□□□□ 0.36
PHGDH-223ENST00000641597 SLC10A4Q96EP9 437 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 MAML3Q96JK9 1138 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 PANX3Q96QZ0 392 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 RPS6KL1Q9Y6S9 549 aa17.29■□□□□ 0.36
PHGDH-223ENST00000641597 NVLO15381 856 aaKnown RBP17.28■□□□□ 0.36
PHGDH-223ENST00000641597 FYNP06241 537 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 TPH1P17752 444 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 LILRA4P59901 499 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 MXRA7P84157 204 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 TUBB3Q13509 450 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 RALGPS1Q5JS13 557 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 ZDHHC17Q8IUH5 632 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 ZNF333Q96JL9 665 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 MAN1C1Q9NR34 630 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 SLC7A8Q9UHI5 535 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 PLA2G4CQ9UP65 541 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 RBM47A0AV96 593 aaKnown RBP17.28■□□□□ 0.36
PHGDH-223ENST00000641597 DPPA5A6NC42 116 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 PLIN3O60664 434 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 NEBLO76041 1014 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 IL1BP01584 269 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 DESP17661 470 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 ATP6V1C1P21283 382 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 SLC1A6P48664 564 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 IRF9Q00978 393 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 RIPOR1Q6ZS17 1223 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 GPR142Q7Z601 462 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
PHGDH-223ENST00000641597 SHCBP1Q8NEM2 672 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms