RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 PRCCQ92733 491 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-209ENST00000641074 C1orf74Q96LT6 269 aa18.8■□□□□ 0.6
PHGDH-209ENST00000641074 LBHD1Q9BQE6 289 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-209ENST00000641074 PRDM12Q9H4Q4 367 aa18.8■□□□□ 0.6
PHGDH-209ENST00000641074 PAK5Q9P286 719 aa18.8■□□□□ 0.6
PHGDH-209ENST00000641074 SHOC2Q9UQ13 582 aa18.8■□□□□ 0.6
PHGDH-209ENST00000641074 NR2E3Q9Y5X4 410 aa18.8■□□□□ 0.6
PHGDH-209ENST00000641074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 H0YGN5 161 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 NDC80O14777 642 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 IGLV3-27P01718 113 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 APOEP02649 317 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 HMBSP08397 361 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 HOXC13P31276 330 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 HTR7P34969 479 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 CTNNB1P35222 781 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 ACTN2P35609 894 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 NRG1Q02297 640 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 PLD1Q13393 1074 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 PRKD1Q15139 912 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 TAF12Q16514 161 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 UBAP2Q5T6F2 1119 aaKnown RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 ANKRD22Q5VYY1 191 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 HEATR6Q6AI08 1181 aaKnown RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 C14orf80Q86SX3 495 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 NAT8LQ8N9F0 302 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 CCDC110Q8TBZ0 833 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 HTR3CQ8WXA8 447 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 TBC1D31Q96DN5 1066 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 TRMT2BQ96GJ1 504 aaKnown RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 CDK5RAP1Q96SZ6 601 aaKnown RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 RUFY1Q96T51 708 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 FOXP3Q9BZS1 431 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 ALG13Q9NP73 1137 aaKnown RBP18.79■□□□□ 0.6
PHGDH-209ENST00000641074 MED4Q9NPJ6 270 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 RAD54BQ9Y620 910 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 NFS1Q9Y697 457 aa18.79■□□□□ 0.6
PHGDH-209ENST00000641074 C5orf60A6NFR6 353 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 E9PAM4 449 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 PPP1R12AO14974 1030 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 TGM5O43548 720 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 GCATO75600 419 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 OAS2P29728 719 aaKnown RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 EPHB3P54753 998 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 ERVFC1P60507 584 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 BASP1P80723 227 aaKnown RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 AP1B1Q10567 949 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 HSP90B2PQ58FF3 399 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 DNAJB7Q7Z6W7 309 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 CCNYQ8ND76 341 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 OR2W6PQ8NHA6 318 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 TCF25Q9BQ70 676 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 MTIF3Q9H2K0 278 aaKnown RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 TRPM5Q9NZQ8 1165 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 DNMT3LQ9UJW3 386 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 TCRBV7S3A2A0A539 114 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 SERPINB6P35237 376 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 ATP5C1P36542 298 aaKnown RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 TUBP50607 506 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 RING1Q06587 406 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 MS4A13Q5J8X5 152 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 HECTD3Q5T447 861 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 LRIG3Q6UXM1 1119 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 TADA2BQ86TJ2 420 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 HOOK3Q86VS8 718 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 ATP6V0D2Q8N8Y2 350 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 P2RY11Q96G91 374 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 BTN2A3PQ96KV6 586 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 KLHL5Q96PQ7 755 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 SH3GL2Q99962 352 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 KLC2Q9H0B6 622 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 CDC42EP4Q9H3Q1 356 aaKnown RBP18.78■□□□□ 0.6
PHGDH-209ENST00000641074 RAB6BQ9NRW1 208 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 SLC12A6Q9UHW9 1150 aa18.78■□□□□ 0.6
PHGDH-209ENST00000641074 LINC01553A4QN01 128 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 GOLGA8MH3BSY2 632 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 FGF10O15520 208 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-209ENST00000641074 RIPK2O43353 540 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 KPNA1P52294 538 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-209ENST00000641074 GAD2Q05329 585 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 SLC29A2Q14542 456 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 TRMT10CQ7L0Y3 403 aaKnown RBP18.77■□□□□ 0.6
PHGDH-209ENST00000641074 ZNF683Q8IZ20 524 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 PSMG2Q969U7 264 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 RBM15Q96T37 977 aaKnown RBP eCLIP18.77■□□□□ 0.64e-7■■■□□ 17.3
PHGDH-209ENST00000641074 CATSPERBQ9H7T0 1116 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 LZTS1Q9Y250 596 aa18.77■□□□□ 0.6
PHGDH-209ENST00000641074 NCAM2O15394 837 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 COCHO43405 550 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 RRP9O43818 475 aaKnown RBP18.76■□□□□ 0.59
PHGDH-209ENST00000641074 TMEM63AO94886 807 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 CSPG5O95196 566 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 DNAJB1P25685 340 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 GALNT2Q10471 571 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 AUHQ13825 339 aaKnown RBP18.76■□□□□ 0.59
PHGDH-209ENST00000641074 DENND2CQ68D51 928 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 KLHDC10Q6PID8 442 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 RELL1Q8IUW5 271 aa18.76■□□□□ 0.59
PHGDH-209ENST00000641074 DPF3Q92784 378 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms