RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CPNE1Q99829 537 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 KIF17Q9P2E2 1029 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 WRAP73Q9P2S5 460 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 FCHO1O14526 889 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 DDHD2O94830 711 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 SEC24DO94855 1032 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 MPOP05164 745 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 ABHD2P08910 425 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 DNAJB2P25686 324 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 PSMB4P28070 264 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 FLT3P36888 993 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 MRPS6P82932 125 aaKnown RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 PDPK2PQ6A1A2 396 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 CCDC134Q9H6E4 229 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 ABCC13Q9NSE7 274 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 SLC4A7Q9Y6M7 1214 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 ERI2A8K979 691 aaKnown RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 SNX3O60493 162 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 CRYBB1P53674 252 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 CCDC153Q494R4 210 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 SNX31Q8N9S9 440 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 ZBTB10Q96DT7 871 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 ADGRE3Q9BY15 652 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 DUOX1Q9NRD9 1551 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 NCF1BA6NI72 391 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 NCF1CA8MVU1 366 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 PIAS1O75925 651 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 NCF1P14598 390 aaPredicted RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 SLC1A6P48664 564 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 NBPF20Q3BBV1 942 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 ZNF333Q96JL9 665 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 MAF1Q9H063 256 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 CLPBQ9H078 707 aa17.99■□□□□ 0.47
SCARB2-223ENST00000640640 STX18Q9P2W9 335 aaKnown RBP17.99■□□□□ 0.47
SCARB2-223ENST00000640640 PRPF4O43172 522 aaKnown RBP eCLIP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 AASDHQ4L235 1098 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 ARHGAP15Q53QZ3 475 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 EXOC3L1Q86VI1 746 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 TDRD5Q8NAT2 981 aaKnown RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 CDH9Q9ULB4 789 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 SERPINB3P29508 390 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 ZCCHC23Q6ZST2 131 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 C18orf25Q96B23 403 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 TCF7L2Q9NQB0 619 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 ST3GAL5Q9UNP4 418 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 R3HDM2Q9Y2K5 976 aaKnown RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 PQBP1O60828 265 aaKnown RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 TFE3P19532 575 aaPredicted RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 CRADDP78560 199 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 PSTKQ8IV42 348 aaKnown RBP17.98■□□□□ 0.47
SCARB2-223ENST00000640640 YME1L1Q96TA2 773 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 ATP13A1Q9HD20 1204 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 SIX2Q9NPC8 291 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 SMPD4Q9NXE4 827 aa17.98■□□□□ 0.47
SCARB2-223ENST00000640640 KDM3BQ7LBC6 1761 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 ALADP13716 330 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 GOT1P17174 413 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 RAB42Q8N4Z0 105 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 OR52K1Q8NGK4 314 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 C12orf42Q96LP6 360 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 TCRBV7S2A1N4TA0A589 114 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 SRRM3A6NNA2 597 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 ITGALP20701 1170 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 ADSSP30520 456 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 CYP2C18P33260 490 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 MATKP42679 507 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 EPHB3P54753 998 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 C1orf127Q8N9H9 656 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 PHF21BQ96EK2 531 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 CDK5RAP1Q96SZ6 601 aaKnown RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 SOX13Q9UN79 622 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 BANF1O75531 89 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 ERVK-10P10266 1014 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 PRKAA1Q13131 559 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 CYLC2Q14093 348 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 USP6NLQ92738 828 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 LPPQ93052 612 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 UTP6Q9NYH9 597 aaKnown RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 RGPD2P0DJD1 1756 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 RTN3O95197 1032 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 ATP4AP20648 1035 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 FKBP1BP68106 108 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 FAM110CQ1W6H9 321 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 KYAT3Q6YP21 454 aaKnown RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 CLEC4FQ8N1N0 589 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 MRPL45Q9BRJ2 306 aaKnown RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 ACSS3Q9H6R3 686 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 HMX1Q9NP08 348 aaPredicted RBP17.97■□□□□ 0.47
SCARB2-223ENST00000640640 MARCH2Q9P0N8 246 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 PCDHA2Q9Y5H9 948 aa17.97■□□□□ 0.47
SCARB2-223ENST00000640640 TPST1O60507 370 aa17.96■□□□□ 0.47
SCARB2-223ENST00000640640 MT-CO1P00395 513 aa17.96■□□□□ 0.47
SCARB2-223ENST00000640640 TPBGLP0DKB5 382 aa17.96■□□□□ 0.47
SCARB2-223ENST00000640640 ERCC2P18074 760 aa17.96■□□□□ 0.47
SCARB2-223ENST00000640640 HIRAP54198 1017 aaPredicted RBP17.96■□□□□ 0.47
SCARB2-223ENST00000640640 RETSATQ6NUM9 610 aa17.96■□□□□ 0.47
SCARB2-223ENST00000640640 TMEM154Q6P9G4 183 aa17.96■□□□□ 0.47
SCARB2-223ENST00000640640 LCLAT1Q6UWP7 414 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms