RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ME2P23368 584 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 GRK2P25098 689 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 ADSLP30566 484 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-221ENST00000638141 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
CAPN3-221ENST00000638141 NSFP46459 744 aaKnown RBP12.32□□□□□ -0.44
CAPN3-221ENST00000638141 GCLMP48507 274 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 GCNT1Q02742 428 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 PTK2BQ14289 1009 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 RAB39AQ14964 217 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 PRR16Q569H4 304 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 ANKRD22Q5VYY1 191 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 NEK10Q6ZWH5 1172 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 USP43Q70EL4 1123 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 MFSD2AQ8NA29 543 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 BHLHE22Q8NFJ8 381 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-221ENST00000638141 PNPT1Q8TCS8 783 aaKnown RBP12.32□□□□□ -0.44
CAPN3-221ENST00000638141 KAT5Q92993 513 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 YTHDF1Q9BYJ9 559 aaKnown RBP12.32□□□□□ -0.44
CAPN3-221ENST00000638141 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 HACD3Q9P035 362 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 VPS51Q9UID3 782 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 TEX264Q9Y6I9 313 aa12.32□□□□□ -0.44
CAPN3-221ENST00000638141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-221ENST00000638141 ILVBLA1L0T0 632 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 CLDN25C9JDP6 229 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 TMX2-CTNND1H3BSU7 103 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 RNF103O00237 685 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
CAPN3-221ENST00000638141 ACOT8O14734 319 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 MYO1DO94832 1006 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 BCL10O95999 233 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 PTPN1P18031 435 aaKnown RBP12.31□□□□□ -0.44
CAPN3-221ENST00000638141 GABRB2P47870 512 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 SCNN1DP51172 638 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 CDH15P55291 814 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 WDR45BQ5MNZ6 344 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 ODR4Q5SWX8 454 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 SPOCD1Q6ZMY3 1216 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 ANKRD13BQ86YJ7 626 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-221ENST00000638141 ANGPTL6Q8NI99 470 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 TXNDC15Q96J42 360 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 NANOGQ9H9S0 305 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 TMEM8AQ9HCN3 771 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 TRAF6Q9Y4K3 522 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
CAPN3-221ENST00000638141 GOLGA8SH3BPF8 625 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 GOLGA8MH3BSY2 632 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 SGK1O00141 431 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 AKAP10O43572 662 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 SCO2O43819 266 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 NUAK1O60285 661 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 CPNE6O95741 557 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 SERPINE1P05121 402 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 P4HBP07237 508 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ENO2P09104 434 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 UBL4AP11441 157 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 KRT5P13647 590 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 KCNA2P16389 499 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 CD58P19256 250 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 PRKCHP24723 683 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 SLC1A6P48664 564 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 TUBA3CQ13748 450 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 HERC3Q15034 1050 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 BBS9Q3SYG4 887 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ZNF618Q5T7W0 954 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 GPR107Q5VW38 600 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 GALNT18Q6P9A2 607 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 USP37Q86T82 979 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 DCP2Q8IU60 420 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 CPNE9Q8IYJ1 553 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 EFCAB3Q8N7B9 438 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 NACC1Q96RE7 527 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ST6GALNAC4Q9H4F1 302 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 HMG20AQ9NP66 347 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ANLNQ9NQW6 1124 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 SACM1LQ9NTJ5 587 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 DUS2Q9NX74 493 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 hCG_1818297A0A087WSY0 165 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 DYTNA2CJ06 578 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 FAM172BPA6NC97 362 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 CYB561D2O14569 222 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 KLHL41O60662 606 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 GUCY1B2O75343 617 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 GMNNO75496 209 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 BTDP43251 543 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 PSMD8P48556 350 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 ADAM17P78536 824 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 PMS2P3Q13401 168 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 PHF13Q86YI8 300 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 DSELQ8IZU8 1212 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 FAM47BQ8NA70 645 aa12.3□□□□□ -0.44
CAPN3-221ENST00000638141 RP9Q8TA86 221 aaKnown RBP12.3□□□□□ -0.44
CAPN3-221ENST00000638141 TMC2Q8TDI7 906 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms