RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ARCQ7LC44 396 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 LEMD2Q8NC56 503 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 APOL5Q9BWW9 433 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 PRKD2Q9BZL6 878 aa15.43■□□□□ 0.06
UBE3A-227ENST00000638011 AAGABQ6PD74 315 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 SMYD1Q8NB12 490 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 NDNQ99608 321 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 TTYH1Q9H313 450 aaPredicted RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 PCDH9Q9HC56 1237 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ZNF224Q9NZL3 707 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CYP26A1O43174 497 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 GYG1P46976 350 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ELF3P78545 371 aaPredicted RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 INSCQ1MX18 579 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ERAP2Q6P179 960 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 USP17L2Q6R6M4 530 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CDK5RAP1Q96SZ6 601 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 PRDM15P57071 1507 aaPredicted RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 TBX3O15119 743 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ORC5O43913 435 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CST8O60676 142 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ERN1O75460 977 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 HKDC1Q2TB90 917 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 SGO1Q5FBB7 561 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 PRR5LQ6MZQ0 368 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 PROSER1Q86XN7 944 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CCDC115Q96NT0 180 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CDC42EP4Q9H3Q1 356 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 RGS14O43566 566 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CHRM3P20309 590 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 PSMA1P25786 263 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 IST1P53990 364 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 TOB2Q14106 344 aaPredicted RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CWF19L1Q69YN2 538 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 METTL16Q86W50 562 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 POLR3FQ9H1D9 316 aaPredicted RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 KCTD10Q9H3F6 313 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 PRPF19Q9UMS4 504 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 DPYSL4O14531 572 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 GPD1P21695 349 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 SLC5A9Q2M3M2 681 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 NEDD1Q8NHV4 660 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 NSUN6Q8TEA1 469 aaKnown RBP15.42■□□□□ 0.06
UBE3A-227ENST00000638011 OSBP2Q969R2 916 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 FLT1P17948 1338 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 RGSL1A5PLK6 1076 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 TMEM132DQ14C87 1099 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ANKRD13AQ8IZ07 590 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 OR2W6PQ8NHA6 318 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 KCNH1O95259 989 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 NRG3P56975 720 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 CDC16Q13042 620 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 NR6A1Q15406 480 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ARMC6Q6NXE6 501 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 TXNDC11Q6PKC3 985 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 FAM71DQ8N9W8 422 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 SPEF1Q9Y4P9 236 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 TSPOAP1O95153 1857 aa15.42■□□□□ 0.06
UBE3A-227ENST00000638011 ETS1P14921 441 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 TET3O43151 1660 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 FAM240BA0A1B0GVZ2 78 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 BBOX1O75936 387 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PRG2P13727 222 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 ERP29P30040 261 aaKnown RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PABPC5Q96DU9 382 aaKnown RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PNKPQ96T60 521 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 CEP152O94986 1710 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 EMC1Q8N766 993 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 EIF2AK1Q9BQI3 630 aaKnown RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 JPH1Q9HDC5 661 aaPredicted RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 DNAJC11Q9NVH1 559 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 CRLS1Q9UJA2 301 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 DNAJC16Q9Y2G8 782 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 EPHB2P29323 1055 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 C15orf40Q8WUR7 153 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 SP140LQ9H930 580 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 CAB39LQ9H9S4 337 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 KIAA1257Q9ULG3 409 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 GPR1P46091 355 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 XKRXQ6PP77 449 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 RPTNQ6XPR3 784 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 HS6ST3Q8IZP7 471 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 FIG4Q92562 907 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 MUC3BQ9H195 1237 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PDGFCQ9NRA1 345 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PTTG2Q9NZH5 202 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PCDHA6Q9UN73 950 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PCDHA8Q9Y5H6 950 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 SMNDC1O75940 238 aaKnown RBP eCLIP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 PTPN1P18031 435 aaKnown RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 ERCC2P18074 760 aa15.41■□□□□ 0.06
UBE3A-227ENST00000638011 RBM44Q6ZP01 1051 aaKnown RBP15.41■□□□□ 0.06
UBE3A-227ENST00000638011 TMC3Q7Z5M5 1100 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms