RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KLC4Q9NSK0 619 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 KLHL28Q9NXS3 571 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 MRPS7Q9Y2R9 242 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 ARL2BPQ9Y2Y0 163 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 ANKDD1BA6NHY2 528 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 ABL2P42684 1182 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 MRPS35P82673 323 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 DHRS1Q96LJ7 313 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 OSBPL2Q9H1P3 480 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 CCDC134Q9H6E4 229 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 MCIDASD6RGH6 385 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SERPINH1P50454 418 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 PSRC1Q6PGN9 363 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 ULK2Q8IYT8 1036 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 CCDC189A1A4V9 331 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 USP12O75317 370 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SERPINB8P50452 374 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 DGKZQ13574 1117 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 APBA2Q99767 749 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 PTPAQ15257 358 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SLC15A2Q16348 729 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 PGBD2Q6P3X8 592 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SYT15Q9BQS2 421 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 ACAT2Q9BWD1 397 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 NEK6Q9HC98 313 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 PTGES3LE9PB15 166 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 KLHL2O95198 593 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 CCR1P32246 355 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 PKN1Q16512 942 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 ZNF544Q6NX49 715 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 CHPFQ8IZ52 775 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 ADGRG2Q8IZP9 1017 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 FMR1NBQ8N0W7 255 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 MID1IP1Q9NPA3 183 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 RPAP1Q9BWH6 1393 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 OR56A5P0C7T3 313 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 FDX1P10109 184 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 BGNP21810 368 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 EQTNQ9NQ60 294 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 DCLK1O15075 740 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 MICAL2O94851 1124 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 MAGEA10P43363 369 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 PDZK1Q5T2W1 519 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 RXFP2Q8WXD0 754 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 ING5Q8WYH8 240 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 FFAR3O14843 346 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 GPR42O15529 346 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 ZNF862O60290 1169 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 IGSF6O95976 241 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 GPR15P49685 360 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 C15orf59Q2T9L4 293 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 TFDP3Q5H9I0 405 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 IQSEC1Q6DN90 963 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 ACAD10Q6JQN1 1059 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 LGMNQ99538 433 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 CDADC1Q9BWV3 514 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D23Q9NUY8 699 aa18.21■□□□□ 0.51
CACNA1A-227ENST00000636549 TALDO1P37837 337 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 CXCL17Q6UXB2 119 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 FAM45AQ8TCE6 357 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 HELQQ8TDG4 1101 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 CCSER1Q9C0I3 900 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 CDY2AQ9Y6F7 541 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 CDY1Q9Y6F8 540 aa18.21■□□□□ 0.5
CACNA1A-227ENST00000636549 CYLC2Q14093 348 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 GFOD2Q3B7J2 385 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 KCNK16Q96T55 309 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 CES2O00748 559 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 RAMP2O60895 175 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 KHDRBS3O75525 346 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 ANXA5P08758 320 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 COPAP53621 1224 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 FSCN1Q16658 493 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 SCIMPQ6UWF3 145 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 LIMD1Q9UGP4 676 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 INSRRP14616 1297 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 AMPD1P23109 780 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 HSPA14Q0VDF9 509 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 DDR2Q16832 855 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 SEMA4BQ9NPR2 832 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 SNPHO15079 494 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 GINS4Q9BRT9 223 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 PDCD10Q9BUL8 212 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 TRIM9Q9C026 710 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 TMPRSS4Q9NRS4 437 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 HEY2Q9UBP5 337 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 ADGRG1Q9Y653 693 aa18.2■□□□□ 0.5
CACNA1A-227ENST00000636549 CCDC154A6NI56 674 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 RASGRP1O95267 797 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 PIRTP0C851 137 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 ITIH2P19823 946 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 MGAT1P26572 445 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 HSD17B3P37058 310 aa18.19■□□□□ 0.5
CACNA1A-227ENST00000636549 MC1RQ01726 317 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms