RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PCDH19Q8TAB3 1148 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 KCTD14Q9BQ13 255 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 POLR3FQ9H1D9 316 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PABPC3Q9H361 631 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PRDM16Q9HAZ2 1276 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SRP68Q9UHB9 627 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 AGAP1Q9UPQ3 857 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TBC1D30Q9Y2I9 924 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 V9GYQ6 96 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SPTBN1Q01082 2364 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 XKRYO14609 159 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 GLP2RO95838 553 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NR3C1P04150 777 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TGM2P21980 687 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CCND1P24385 295 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NAA30Q147X3 362 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 KLHL26Q53HC5 615 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 EFHC1Q5JVL4 640 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SNRNP48Q6IEG0 339 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 KCNV2Q8TDN2 545 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZFRQ96KR1 1074 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 LMAN2LQ9H0V9 348 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TRABDQ9H4I3 376 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PCSK1NQ9UHG2 260 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PRR12Q9ULL5 1215 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 BRWD1Q9NSI6 2320 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CARMIL3Q8ND23 1372 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ABCB11O95342 1321 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ARHGEF33A8MVX0 844 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 HAT1O14929 419 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MLYCDO95822 493 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 HOXC6P09630 235 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 EIF2AK2P19525 551 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 HTR1BP28222 390 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RXRBP28702 533 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RPL10AP62906 217 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 DDX39BQ13838 428 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SETMARQ53H47 684 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ATXN7L2Q5T6C5 722 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 C10orf107Q8IVU9 208 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TNS4Q8IZW8 715 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZYG11BQ9C0D3 744 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NUAK2Q9H093 628 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SLC6A15Q9H2J7 730 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RSAD1Q9HA92 442 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ELOVL2Q9NXB9 296 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MLXQ9UH92 298 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CYTH4Q9UIA0 394 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MRPS33Q9Y291 106 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SLC9A8Q9Y2E8 581 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 LYVE1Q9Y5Y7 322 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PRPF3O43395 683 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PPM1BO75688 479 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 KCNA5P22460 613 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CACNB1Q02641 598 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FAM187BQ17R55 369 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DOK7Q18PE1 504 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 INO80DQ53TQ3 878 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RNF19BQ6ZMZ0 732 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DGLUCYQ7Z3D6 616 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 HDDC3Q8N4P3 179 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 LRRC17Q8N6Y2 441 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ARRDC4Q8NCT1 418 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ETNPPLQ8TBG4 499 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DNAJA4Q8WW22 397 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SEMA6CQ9H3T2 930 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PCDHGC5Q9Y5F6 944 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ARAP1Q96P48 1450 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 B8ZZF3 427 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PPP1R37O75864 691 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FGFR1P11362 822 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ITGA4P13612 1032 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 BMP7P18075 431 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ME2P23368 584 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF844Q08AG5 666 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PTPRNQ16849 979 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 WDR59Q6PJI9 974 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CCNJLQ8IV13 435 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CROCCP3Q8IVE0 287 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FOXP4Q8IVH2 680 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 EMC1Q8N766 993 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 OR10H1Q9Y4A9 318 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PALMO75781 387 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 MARSP56192 900 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SELENOVP59797 346 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 LLGL1Q15334 1064 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ALG10BQ5I7T1 473 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DENND1BQ6P3S1 775 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ERICH5Q6P6B1 374 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 TMC8Q8IU68 726 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PHF12Q96QT6 1004 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 MROH8Q9H579 483 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF175Q9Y473 711 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CACNA1BQ00975 2339 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 A0A1W2PQD8 194 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 HSBP1L1C9JCN9 74 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms