RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 TOMM40LQ969M1 308 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 HDAC11Q96DB2 347 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 MSI2Q96DH6 328 aaKnown RBP-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 IL17RAQ96F46 866 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 TNIP3Q96KP6 325 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 RETNLBQ9BQ08 111 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 PIMREGQ9BSJ6 248 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 LRRC1Q9BTT6 524 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 TUBB2BQ9BVA1 445 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 ELOVL1Q9BW60 279 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 CXXC4Q9H2H0 198 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 VCXQ9H320 206 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 SMOC1Q9H4F8 434 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 Q9N2K0 584 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 ARHGEF3Q9NR81 526 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 INTS13Q9NVM9 706 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 INTS10Q9NVR2 710 aaKnown RBP-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 HCN3Q9P1Z3 774 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 KLHL8Q9P2G9 620 aaPredicted RBP-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 ABCD2Q9UBJ2 740 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 DHCR7Q9UBM7 475 aaKnown RBP-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 FBXL21Q9UKT6 434 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 TRAK1Q9UPV9 953 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 EFR3BQ9Y2G0 817 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 AMOTL2Q9Y2J4 779 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 COA3Q9Y2R0 106 aaPredicted RBP-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 CD2APQ9Y5K6 639 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 NR2E3Q9Y5X4 410 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 CHD8Q9HCK8 2581 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 MEGF6O75095 1541 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 ADGRA2Q96PE1 1338 aa-0.9□□□□□ -2.55
CDKL5-210ENST00000636046 LAMB4A4D0S4 1761 aa-0.91□□□□□ -2.55
CDKL5-210ENST00000636046 IGHV4OR15-8A0A075B7B6 117 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 IGKV1D-8A0A087WSZ0 117 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CCDC78A2IDD5 438 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ZSCAN5BA6NJL1 495 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 BECN2A8MW95 431 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 E7ENQ6 273 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 H7C1D1 291 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 MSH4O15457 936 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PHF1O43189 567 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 GTPBP6O43824 516 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 EXOC3O60645 756 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 MAFKO60675 156 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ATG13O75143 517 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF217O75362 1048 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 KIF20AO95235 890 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 GJB6O95452 261 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 FSTL3O95633 263 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CRTAMO95727 393 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CAVIN2O95810 425 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 HPP00738 406 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 THY1P04216 161 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 GNAI2P04899 355 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 RPLP1P05386 114 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PRSS56P0CW18 603 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ACP2P11117 423 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 MYOD1P15172 320 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CD1EP15812 388 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 JAK1P23458 1154 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 BRD2P25440 801 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PTPN3P26045 913 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 GIFP27352 417 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 HOXA13P31271 388 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CHRNA3P32297 505 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CIITAP33076 1130 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ALDH1A3P47895 512 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ALDH5A1P51649 535 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 CDH15P55291 814 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ABCE1P61221 599 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 HSF1Q00613 529 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 MBTD1Q05BQ5 628 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 FAM160A1Q05DH4 1040 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ITIH3Q06033 890 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PTPN11Q06124 597 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PAX8Q06710 450 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SSRP1Q08945 709 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 ASPHQ12797 758 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TRAF3Q13114 568 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PABPC4Q13310 644 aaKnown RBP eCLIP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 MRPL49Q13405 166 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 LRRC14Q15048 493 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 STILQ15468 1287 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 PNLIPRP3Q17RR3 467 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 DPY19L1Q2PZI1 675 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 DEFB115Q30KQ5 88 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 GNPTABQ3T906 1256 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 FASTKD1Q53R41 847 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TDRD12Q587J7 1177 aaKnown RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 TRIM61Q5EBN2 209 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 COX20Q5RI15 118 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 NBPF12Q5TAG4 269 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 GRHL2Q6ISB3 625 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 RCSD1Q6JBY9 416 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 HCP5Q6MZN7 132 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 FAM53AQ6NSI3 398 aaPredicted RBP-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 SMARCD3Q6STE5 483 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 IL27RAQ6UWB1 636 aa-0.91□□□□□ -2.56
CDKL5-210ENST00000636046 KIRREL2Q6UWL6 708 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms