RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 PSMB4P28070 264 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 BRCC3P46736 316 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 GLUD2P49448 558 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 SEMA3BQ13214 749 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 PAFAH1B3Q15102 231 aaKnown RBP12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 PDK1Q15118 436 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 MRPL10Q7Z7H8 261 aaKnown RBP12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 ZNF567Q8N184 647 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 NPWQ8N729 165 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 RAET1EQ8TD07 263 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 ERP27Q96DN0 273 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 MANSC1Q9H8J5 431 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 SPC25Q9HBM1 224 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 CNGB3Q9NQW8 809 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 PCDHA11Q9Y5I1 949 aa12.82□□□□□ -0.36
UBASH3A-209ENST00000635325 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SF3B1O75533 1304 aaKnown RBP eCLIP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 GPR182O15218 404 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 OPHN1O60890 802 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 KRT37O76014 449 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 B3GAT3O94766 335 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 LTFP02788 710 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 ASGR1P07306 291 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SNRPAP09012 282 aaKnown RBP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 GSTA2P09210 222 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 ERCC2P18074 760 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 CCND3P30281 292 aaPredicted RBP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 RPL9P32969 192 aaKnown RBP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 FDFT1P37268 417 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SESN2P58004 480 aaPredicted RBP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SCAPQ12770 1279 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 OLIG2Q13516 323 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 BSPRYQ5W0U4 402 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 TTC17Q96AE7 1141 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 STAMBPL1Q96FJ0 436 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SMARCD1Q96GM5 515 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 PGLYRP2Q96PD5 576 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SLC9A7Q96T83 725 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 TMLHEQ9NVH6 421 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 MOCS1Q9NZB8 636 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 PTCH2Q9Y6C5 1203 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 USH1CQ9Y6N9 552 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 C9IYK1 514 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 COPEO14579 308 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 MGRN1O60291 552 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 ITGB1P05556 798 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 BGNP21810 368 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 LPIN1Q14693 890 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 SMAD1Q15797 465 aaKnown RBP12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 KCNA10Q16322 511 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 MROH9Q5TGP6 573 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 CASC4Q6P4E1 433 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 RFWD2Q8NHY2 731 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 NTAN1Q96AB6 310 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 TMEM209Q96SK2 561 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 GORASP1Q9BQQ3 440 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 PRDM16Q9HAZ2 1276 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 XPNPEP3Q9NQH7 507 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 KANSL3Q9P2N6 904 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 INPP5FQ9Y2H2 1132 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 NUMBLQ9Y6R0 609 aa12.81□□□□□ -0.36
UBASH3A-209ENST00000635325 PPP1R12AO14974 1030 aaPredicted RBP12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 STK10O94804 968 aaKnown RBP12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 BDNFP23560 247 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 MGAT1P26572 445 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 PCSK1P29120 753 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 SERPINB4P48594 390 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 STEAP4Q687X5 459 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 LRRC8BQ6P9F7 803 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 ASRGL1Q7L266 308 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 RPAINQ86UA6 219 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 LRRTM3Q86VH5 581 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 CHSY1Q86X52 802 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 SUGP1Q8IWZ8 645 aaKnown RBP12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 OR10T2Q8NGX3 314 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 ARNTL2Q8WYA1 636 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 KLHL29Q96CT2 875 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 LRRC37BQ96QE4 947 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 SLC13A1Q9BZW2 595 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 CSNK1G1Q9HCP0 422 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 EIF2B3Q9NR50 452 aaKnown RBP12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 DCTN4Q9UJW0 460 aa12.8□□□□□ -0.36
UBASH3A-209ENST00000635325 CFAP73A6NFT4 308 aa12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 SDR42E2A6NKP2 422 aa12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 ZNF623O75123 536 aa12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 TOP3BO95985 862 aaKnown RBP12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 ODC1P11926 461 aa12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 MLNP12872 115 aa12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 CCNB1P14635 433 aa12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 NQO1P15559 274 aaKnown RBP12.79□□□□□ -0.36
UBASH3A-209ENST00000635325 TPI1P60174 286 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms