RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MEI1Q5TIA1 1274 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 LRRC38Q5VT99 294 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 CYP4V2Q6ZWL3 525 aaPredicted RBP14.94□□□□□ -0.02
LINC00339-208ENST00000634934 HTR3DQ70Z44 454 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 RIN3Q8TB24 985 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 KRT35Q92764 455 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 CD101Q93033 1021 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 UHRF1Q96T88 793 aaPredicted RBP14.94□□□□□ -0.02
LINC00339-208ENST00000634934 COL25A1Q9BXS0 654 aaPredicted RBP14.94□□□□□ -0.02
LINC00339-208ENST00000634934 MAGEB5Q9BZ81 275 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 TSPYL1Q9H0U9 437 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 DHX35Q9H5Z1 703 aaKnown RBP14.94□□□□□ -0.02
LINC00339-208ENST00000634934 TRPV4Q9HBA0 871 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.94□□□□□ -0.02
LINC00339-208ENST00000634934 EPS15L1Q9UBC2 864 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 ADAM21Q9UKJ8 722 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 AGO1Q9UL18 857 aaKnown RBP14.94□□□□□ -0.02
LINC00339-208ENST00000634934 NR2E1Q9Y466 385 aa14.94□□□□□ -0.02
LINC00339-208ENST00000634934 TTC28Q96AY4 2481 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 GOLGA6L7A0A1B0GV03 622 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 E2F8A0AVK6 867 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 MIF4GDA9UHW6 222 aaKnown RBP14.93□□□□□ -0.02
LINC00339-208ENST00000634934 C2CD4DB7Z1M9 353 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 ENC1O14682 589 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 ACSL4O60488 711 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 GREM1O60565 184 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 KRT1P04264 644 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 TCP1P17987 556 aaKnown RBP14.93□□□□□ -0.02
LINC00339-208ENST00000634934 FCARP24071 287 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 CTNNA2P26232 953 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 CTNNA1P35221 906 aaKnown RBP14.93□□□□□ -0.02
LINC00339-208ENST00000634934 AIF1P55008 147 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 SCAPQ12770 1279 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 MTA1Q13330 715 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 KRT81Q14533 505 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 CA9Q16790 459 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 CCDC70Q6NSX1 233 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 PARM1Q6UWI2 310 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 POLNQ7Z5Q5 900 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 ADHFE1Q8IWW8 467 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 BBS7Q8IWZ6 715 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 PYROXD2Q8N2H3 581 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 UBL4BQ8N7F7 174 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 NOA1Q8NC60 698 aaKnown RBP14.93□□□□□ -0.02
LINC00339-208ENST00000634934 KCTD6Q8NC69 237 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 TEKT4Q8WW24 435 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 LRRC3BQ96PB8 259 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 HAPLN3Q96S86 360 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 KXD1Q9BQD3 176 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 ZNF510Q9Y2H8 683 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 PCDHA3Q9Y5H8 950 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 HS3ST4Q9Y661 456 aa14.93□□□□□ -0.02
LINC00339-208ENST00000634934 PI4K2BG5E9Z4 385 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 H3BQF6 201 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 TCF3P15923 654 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 GLE1Q53GS7 698 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 PPP6R3Q5H9R7 873 aaPredicted RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 MS4A13Q5J8X5 152 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 ADGRF1Q5T601 910 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 PIK3R6Q5UE93 754 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 RAP1GAP2Q684P5 730 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 NADSYN1Q6IA69 706 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 Q6ZNB5 142 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 MTSS1LQ765P7 747 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 CHSY1Q86X52 802 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 PSTKQ8IV42 348 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 BPIFB1Q8TDL5 484 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 FGF14Q92915 247 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 AZIN2Q96A70 460 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 E2F7Q96AV8 911 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 HES6Q96HZ4 224 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 KCTD15Q96SI1 283 aaPredicted RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 OBP2AQ9NY56 170 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 DDX56Q9NY93 547 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 OR12D3Q9UGF7 316 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 SNX12Q9UMY4 172 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 TRDMT1O14717 391 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 DDX3YO15523 660 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 CREB3O43889 395 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 SRGAP2O75044 1071 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 LATS1O95835 1130 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 ATP1A1P05023 1023 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 TACR2P21452 398 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 MLLT6P55198 1093 aaPredicted RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 CDH6P55285 790 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 RWDD2BP57060 319 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 AUHQ13825 339 aaKnown RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 HSP90B2PQ58FF3 399 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 RFWD3Q6PCD5 774 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 VITQ6UXI7 678 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 YAF2Q8IY57 180 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 KATNAL2Q8IYT4 538 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 RAPGEF5Q92565 580 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 ALG3Q92685 438 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
LINC00339-208ENST00000634934 ELSPBP1Q96BH3 223 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 PSMB7Q99436 277 aa14.92□□□□□ -0.02
LINC00339-208ENST00000634934 DDX50Q9BQ39 737 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms