RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MGEA5O60502 916 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 COL9A1P20849 921 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 GJA8P48165 433 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 EPHB1P54762 984 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 DAOAP59103 153 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 BASP1P80723 227 aaKnown RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 CA9Q16790 459 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 KLHL38Q2WGJ6 581 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ARL13BQ3SXY8 428 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 TIGD5Q53EQ6 642 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 RAB6CQ53S08 254 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 SLC45A4Q5BKX6 768 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 EFHC2Q5JST6 749 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 RAB41Q5JT25 222 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 GLB1LQ6UWU2 654 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 EXOC3L1Q86VI1 746 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 URGCPQ8TCY9 931 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 CSPG4P5Q96PW8 444 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 XPO6Q96QU8 1125 aaKnown RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 KCTD15Q96SI1 283 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 NPY6RQ99463 290 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 HTATIP2Q9BUP3 242 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 FTHL17Q9BXU8 183 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 RAB6CQ9H0N0 254 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 USP29Q9HBJ7 922 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 PNPLA8Q9NP80 782 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 RGS18Q9NS28 235 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 ZMYND8Q9ULU4 1186 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-230ENST00000634433 NAALADL1Q9UQQ1 740 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 RAD54BQ9Y620 910 aa7.39□□□□□ -1.23
BRCA1-230ENST00000634433 SF3B1O75533 1304 aaKnown RBP eCLIP7.39□□□□□ -1.231e-9■■■■■ 99.9
BRCA1-230ENST00000634433 MYBPHLA2RUH7 354 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SYNDIG1LA6NDD5 238 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 M0QYT0 321 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 GCATO75600 419 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 POMCP01189 267 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CHN1P15882 459 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CCT5P48643 541 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SARNPP82979 210 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 NR6A1Q15406 480 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 INTS6LQ5JSJ4 861 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 KIAA0319Q5VV43 1072 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 FAM171BQ6P995 826 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 C4orf50Q6ZRC1 276 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 RTL10Q7L3V2 364 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 BNIPLQ7Z465 357 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 ZNF598Q86UK7 904 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CCDC13Q8IYE1 715 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CD99L2Q8TCZ2 262 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 MGARPQ8TDB4 240 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 ZNF473Q8WTR7 871 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 NTAN1Q96AB6 310 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 PGAP3Q96FM1 320 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 PCED1BQ96HM7 432 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SMOQ99835 787 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 ULBP1Q9BZM6 244 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CCDC134Q9H6E4 229 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 LRRC4CQ9HCJ2 640 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CSNK1G1Q9HCP0 422 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 NKIRAS1Q9NYS0 192 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 C5orf60A6NFR6 353 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 H0Y3Z8 333 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 KLF4O43474 513 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 BEST1O76090 585 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 BAIAP3O94812 1187 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 LTFP02788 710 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 GSTA2P09210 222 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CKBP12277 381 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 TFE3P19532 575 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 RBL1P28749 1068 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 MAGEA6P43360 314 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 BBS9Q3SYG4 887 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CCDC38Q502W7 563 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SLC24A5Q71RS6 500 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 BEND5Q7L4P6 421 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CPLX4Q7Z7G2 160 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 FAM131BQ86XD5 332 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 C3orf58Q8NDZ4 430 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 MCUQ8NE86 351 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 TFB1MQ8WVM0 346 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 DYDC1Q8WWB3 177 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 LRRC39Q96DD0 335 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 CHMP6Q96FZ7 201 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 QKIQ96PU8 341 aaKnown RBP eCLIP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 NSRP1Q9H0G5 558 aaKnown RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 C10orf88Q9H8K7 445 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 KCNK9Q9NPC2 374 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 DMAP1Q9NPF5 467 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 SMYD2Q9NRG4 433 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 MTMR10Q9NXD2 777 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 GTF2A1LQ9UNN4 478 aa7.38□□□□□ -1.23
BRCA1-230ENST00000634433 TIMM13Q9Y5L4 95 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-230ENST00000634433 GOLGA8MH3BSY2 632 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms