RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 ABHD14AQ9BUJ0 271 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 OSBPL5Q9H0X9 879 aaPredicted RBP2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 TP63Q9H3D4 680 aaPredicted RBP2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 CCDC134Q9H6E4 229 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 MSRB1Q9NZV6 116 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 LRFN1Q9P244 771 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 TAGLN3Q9UI15 199 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 LZTS1Q9Y250 596 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 ZBTB1Q9Y2K1 713 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 LRCH1Q9Y2L9 728 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 TTC3P53804 2025 aa2.75□□□□□ -1.97
SCARNA4-201ENST00000629045 FAM90A18PA6NE21 464 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FAM90A16PA6NEW6 464 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 GOLGA6L3A6NEY3 463 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FAM90A9PA6NNJ1 464 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SLC38A8A6NNN8 435 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FAM90A5PA8MXJ8 464 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 F5H423 210 aaPredicted RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 F8W810 466 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SYT5O00445 386 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 BMP15O95972 392 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ALDOAP04075 364 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ENO1P06733 434 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 CD63P08962 238 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ALDOCP09972 364 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FAM90A15PP0C7V4 464 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FAM90A14PP0C7W9 464 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 AKR1A1P14550 325 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 TNFRSF1BP20333 461 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 GRK5P34947 590 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 HTR3AP46098 478 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 CCT4P50991 539 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FOXL2P58012 376 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 B4GALNT1Q00973 533 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SRSF1Q07955 248 aaKnown RBP eCLIP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 HDAC1Q13547 482 aaPredicted RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 BRD3Q15059 726 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 PUM3Q15397 648 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ODF3L2Q3SX64 289 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ARL13AQ5H913 290 aaPredicted RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 LIPMQ5VYY2 423 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 AWAT2Q6E213 333 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 C1orf228Q6PIY5 440 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 KIAA1324Q6UXG2 1013 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SLC39A5Q6ZMH5 540 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 MRPL10Q7Z7H8 261 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 NRSN1Q8IZ57 195 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SPICE1Q8N0Z3 855 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 Q8N9P0 234 aaPredicted RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 POF1BQ8WVV4 589 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 HMGB4Q8WW32 186 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 KAT2BQ92831 832 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 PMM1Q92871 262 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 HMCESQ96FZ2 354 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 PIMREGQ9BSJ6 248 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 KATNAL1Q9BW62 490 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SORBS1Q9BX66 1292 aaKnown RBP2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ZNF700Q9H0M5 742 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 PLCB1Q9NQ66 1216 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 ZBTB40Q9NUA8 1239 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 FBXO4Q9UKT5 387 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 COG5Q9UP83 839 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SLC12A4Q9UP95 1085 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 SLC8A2Q9UPR5 921 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 CNTN6Q9UQ52 1028 aa2.74□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3DA0A087WVF3 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3IA0A087WXS9 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3EA0A087X179 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3KA0A087X1G2 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TRBV5-3A0A0A0MS03 114 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 A0A0G2JK05 382 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3BA6NDS4 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 CXorf65A6NEN9 183 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3FA6NER0 549 aaPredicted RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 AGAP5A6NIR3 686 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 A6NNC1 897 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3LB9A6J9 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 SKAP2O75563 359 aaPredicted RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 ACTL6BO94805 426 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 HEXIM1O94992 359 aaKnown RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 WNT1P04628 370 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3HP0C7X1 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 PSG1P11464 419 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 PNLIPRP1P54315 467 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 LINC00205P59089 165 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TLE3Q04726 772 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TRIM14Q14142 442 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 PTK2BQ14289 1009 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TUBB8Q3ZCM7 444 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 ZACNQ401N2 412 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 MIDNQ504T8 468 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 GLE1Q53GS7 698 aaKnown RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 KIAA1755Q5JYT7 1200 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 NUGGCQ68CJ6 796 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3GQ6DHY5 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 SULT6B1Q6IMI4 303 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 TBC1D3CQ6IPX1 549 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 LRIG3Q6UXM1 1119 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 COLCA1Q6ZS62 124 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 MDGA2Q7Z553 956 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms