RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TMEM184CQ9NVA4 438 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 SLC52A1Q9NWF4 448 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 PCDHB7Q9Y5E2 793 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 TCF20Q9UGU0 1960 aaKnown RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 A0A087WV62 115 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 GXYLT2A0PJZ3 443 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 CER1O95813 267 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 CD63P08962 238 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 T-ENOLP0DO92 83 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 PRF1P14222 555 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 ST6GAL1P15907 406 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 HOXD9P28356 352 aaPredicted RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 THBS4P35443 961 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 HOXD12P35452 270 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 IDUAP35475 653 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 STAT6P42226 847 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 CPA2P48052 419 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 RPS13P62277 151 aaKnown RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 TNFAIP2Q03169 654 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 STIM1Q13586 685 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 C10orf25Q5T742 122 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 ANKRD40Q6AI12 368 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 C1orf228Q6PIY5 440 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 RBM44Q6ZP01 1051 aaKnown RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 UEVLDQ8IX04 471 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 STYXQ8WUJ0 223 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 WDR60Q8WVS4 1066 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 ASB12Q8WXK4 309 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 CELF1Q92879 486 aaKnown RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 MCRS1Q96EZ8 462 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 FAR2Q96K12 515 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 MPHOSPH6Q99547 160 aaKnown RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 SCNM1Q9BWG6 230 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 AGO4Q9HCK5 861 aaKnown RBP3.8□□□□□ -1.8
VBP1-204ENST00000625964 OBP2BQ9NPH6 170 aa3.8□□□□□ -1.8
VBP1-204ENST00000625964 SLC22A23A1A5C7 686 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 GOLGA6L3A6NEY3 463 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 C2CD4BA6NLJ0 364 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 M0QYT0 321 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 GTPBP1O00178 669 aaKnown RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 DNPH1O43598 174 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 USP12O75317 370 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 RPP40O75818 363 aaKnown RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 TNFRSF6BO95407 300 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 RPS6KB1P23443 525 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 HOXA7P31268 230 aaPredicted RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 HTR3AP46098 478 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 SPARCL1Q14515 664 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 TRIM71Q2Q1W2 868 aaKnown RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 GLE1Q53GS7 698 aaKnown RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 PGBD2Q6P3X8 592 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 DHRS13Q6UX07 377 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 ZNF793Q6ZN11 406 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 TRABD2AQ86V40 505 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 ANKRD13BQ86YJ7 626 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 RFX6Q8HWS3 928 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 LAS2Q8IYD9 372 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 NRSN1Q8IZ57 195 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 VPS37AQ8NEZ2 397 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 FAM71BQ8TC56 605 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 TRMT61AQ96FX7 289 aaKnown RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 ZNF845Q96IR2 970 aaPredicted RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 GPR78Q96P69 363 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 PAAF1Q9BRP4 392 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 CRB3Q9BUF7 120 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 WDR12Q9GZL7 423 aaKnown RBP3.79□□□□□ -1.8
VBP1-204ENST00000625964 PRDM16Q9HAZ2 1276 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 MLXIPLQ9NP71 852 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 POT1Q9NUX5 634 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 DAAM1Q9Y4D1 1078 aa3.79□□□□□ -1.8
VBP1-204ENST00000625964 TTC3P53804 2025 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 ABHD14A-ACY1A0A1B0GW23 586 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 LGALS16A8MUM7 142 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 KIF28PB7ZC32 967 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 SKAP2O75563 359 aaPredicted RBP3.78□□□□□ -1.8
VBP1-204ENST00000625964 CTSAP10619 480 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 ZNF84P51523 738 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 SLC12A2P55011 1212 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 AAK1Q2M2I8 961 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 ANXA2RQ3ZCQ2 193 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 WDR93Q6P2C0 686 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 REXO5Q96IC2 774 aaKnown RBP3.78□□□□□ -1.8
VBP1-204ENST00000625964 FOXP1Q9H334 677 aaPredicted RBP3.78□□□□□ -1.8
VBP1-204ENST00000625964 TP63Q9H3D4 680 aaPredicted RBP3.78□□□□□ -1.8
VBP1-204ENST00000625964 CCDC134Q9H6E4 229 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 KCNK9Q9NPC2 374 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 PLCB1Q9NQ66 1216 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 NFU1Q9UMS0 254 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 B3GNT3Q9Y2A9 372 aa3.78□□□□□ -1.8
VBP1-204ENST00000625964 EMSYQ7Z589 1322 aa3.77□□□□□ -1.81
VBP1-204ENST00000625964 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.77□□□□□ -1.81
VBP1-204ENST00000625964 F5H423 210 aaPredicted RBP3.77□□□□□ -1.81
VBP1-204ENST00000625964 NKX2-8O15522 239 aa3.77□□□□□ -1.81
VBP1-204ENST00000625964 CRYABP02511 175 aaKnown RBP3.77□□□□□ -1.81
VBP1-204ENST00000625964 ENO1P06733 434 aaKnown RBP3.77□□□□□ -1.81
VBP1-204ENST00000625964 PEPDP12955 493 aa3.77□□□□□ -1.81
VBP1-204ENST00000625964 TFEBP19484 476 aa3.77□□□□□ -1.81
VBP1-204ENST00000625964 TAS2R50P59544 299 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms