RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PCDHA13Q9Y5I0 950 aa16.78■□□□□ 0.28
CD40-207ENST00000620709 CNOT1A5YKK6 2376 aaKnown RBP16.78■□□□□ 0.28
CD40-207ENST00000620709 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
CD40-207ENST00000620709 A0A087X0T9 212 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 LNP1A1A4G5 178 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 XPO1O14980 1071 aaKnown RBP16.77■□□□□ 0.28
CD40-207ENST00000620709 KRT86O43790 486 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 FAM228BP0C875 321 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 KRT5P13647 590 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 PTGER3P43115 390 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 MAGEA1P43355 309 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 BCAT1P54687 386 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 ADIGQ0VDE8 80 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 MAP7D1Q3KQU3 841 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 SIX6OS1Q8N1H7 587 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 RNF139Q8WU17 664 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 SYT11Q9BT88 431 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 AGO1Q9UL18 857 aaKnown RBP16.77■□□□□ 0.28
CD40-207ENST00000620709 STARD13Q9Y3M8 1113 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.28
CD40-207ENST00000620709 A0A0U1RQJ8 604 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 WASH3PC4AMC7 463 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 PIK3R2O00459 728 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 CYBBP04839 570 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 CISD3P0C7P0 127 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 VDRP11473 427 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 LCP1P13796 627 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 CHKAP35790 457 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 ARHGAP25P42331 645 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 BPIFB4P59827 614 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 ETF1P62495 437 aaKnown RBP16.76■□□□□ 0.27
CD40-207ENST00000620709 IRX4P78413 519 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 RPL6Q02878 288 aaKnown RBP16.76■□□□□ 0.27
CD40-207ENST00000620709 BST2Q10589 180 aaKnown RBP16.76■□□□□ 0.27
CD40-207ENST00000620709 KIF5AQ12840 1032 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 UAP1L1Q3KQV9 507 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 RAB41Q5JT25 222 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 CCDC122Q5T0U0 273 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 LYSMD4Q5XG99 296 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 KIAA1211LQ6NV74 962 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 TMEM270Q6UE05 265 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 ZNF276Q8N554 614 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 EPS8L1Q8TE68 723 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
CD40-207ENST00000620709 EDEM1Q92611 657 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 AGPAT1Q99943 283 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 SLC6A17Q9H1V8 727 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 FAM124BQ9H5Z6 455 aaPredicted RBP16.76■□□□□ 0.27
CD40-207ENST00000620709 CYP8B1Q9UNU6 501 aa16.76■□□□□ 0.27
CD40-207ENST00000620709 A0A1W2PQF6 199 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 DDX3XO00571 662 aaKnown RBP eCLIP16.75■□□□□ 0.276e-6■■■■■ 29.2
CD40-207ENST00000620709 KIF5CO60282 957 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 RGS7P49802 495 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 TRIM61Q5EBN2 209 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 N4BP2L1Q5TBK1 243 aaPredicted RBP16.75■□□□□ 0.27
CD40-207ENST00000620709 DAB2IPQ5VWQ8 1189 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 PSAPL1Q6NUJ1 521 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 ALKBH5Q6P6C2 394 aaKnown RBP16.75■□□□□ 0.27
CD40-207ENST00000620709 KIAA1324Q6UXG2 1013 aaKnown RBP16.75■□□□□ 0.27
CD40-207ENST00000620709 DDI1Q8WTU0 396 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 P2RY11Q96G91 374 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 TMEM9BQ9NQ34 198 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 MYO1AQ9UBC5 1043 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 TM4SF5O14894 197 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 PJA2O43164 708 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 TSPAN3O60637 253 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 CFIP05156 583 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 CYP11B1P15538 503 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 NDUFV2P19404 249 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 ITPKAP23677 461 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 MAPK8P45983 427 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 FYB2Q5VWT5 728 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 SLC36A4Q6YBV0 504 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 SLC47A2Q86VL8 602 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 UBR7Q8N806 425 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 SLC30A5Q8TAD4 765 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 NUSAP1Q9BXS6 441 aaKnown RBP16.75■□□□□ 0.27
CD40-207ENST00000620709 TMEM74BQ9NUR3 256 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 SFMBT1Q9UHJ3 866 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
CD40-207ENST00000620709 NENFQ9UMX5 172 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 CNTN6Q9UQ52 1028 aa16.75■□□□□ 0.27
CD40-207ENST00000620709 GON4LQ3T8J9 2241 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 RCCD1A6NED2 376 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 O00370 1275 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 KCNK5O95279 499 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 CALCAP01258 141 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 HARS2P49590 506 aaKnown RBP16.74■□□□□ 0.27
CD40-207ENST00000620709 GNG11P61952 73 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 STARD3Q14849 445 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 GEN1Q17RS7 908 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 BSPRYQ5W0U4 402 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 PM20D1Q6GTS8 502 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 NOP9Q86U38 636 aaKnown RBP16.74■□□□□ 0.27
CD40-207ENST00000620709 SYT12Q8IV01 421 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 SLC20A1Q8WUM9 679 aa16.74■□□□□ 0.27
CD40-207ENST00000620709 PLD4Q96BZ4 506 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms