RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 SUSD4Q5VX71 490 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 PPM1NQ8N819 430 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 RNPC3Q96LT9 517 aaKnown RBP7.37□□□□□ -1.23
CSMD2-210ENST00000619121 SEPT5Q99719 369 aaPredicted RBP7.37□□□□□ -1.23
CSMD2-210ENST00000619121 KIAA1683Q9H0B3 1180 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 PCDHB11Q9Y5F2 797 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 PCDHGB7Q9Y5F8 929 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 TLX3O43711 291 aaPredicted RBP7.37□□□□□ -1.23
CSMD2-210ENST00000619121 NPR3P17342 541 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 ATP5A1P25705 553 aaKnown RBP7.37□□□□□ -1.23
CSMD2-210ENST00000619121 CAP2P40123 477 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 PDIA2Q13087 525 aaKnown RBP7.37□□□□□ -1.23
CSMD2-210ENST00000619121 LIN54Q6MZP7 749 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 OTOAQ7RTW8 1153 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 FAM220AQ7Z4H9 259 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 ADPRHL2Q9NX46 363 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 SPG21Q9NZD8 308 aa7.37□□□□□ -1.23
CSMD2-210ENST00000619121 BCORL1Q5H9F3 1711 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 A0A0B4J269 797 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 GATBO75879 557 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TUBB3Q13509 450 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 CACTIN-AS1Q8N1I8 211 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TRABDQ9H4I3 376 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ICE1Q9Y2F5 2266 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 A0A0J9YVX5 310 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 USP1O94782 785 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 CCDC92Q53HC0 331 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 INO80DQ53TQ3 878 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ZRANB3Q5FWF4 1079 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TRPC4APQ8TEL6 797 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ANKRD49Q8WVL7 239 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 FKBP10Q96AY3 582 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 NSUN4Q96CB9 384 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PCIF1Q9H4Z3 704 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TBK1Q9UHD2 729 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 MEIS2O14770 477 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 MPZL2O60487 215 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SCARF1Q14162 830 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ZNF268Q14587 947 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 MPZL3Q6UWV2 235 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 COL23A1Q86Y22 540 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TMEM192Q8IY95 271 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SLC38A2Q96QD8 506 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 OMDQ99983 421 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 EXD2Q9NVH0 621 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PCDHGB1Q9Y5G3 927 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SCN11AQ9UI33 1791 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 DDX3XO00571 662 aaKnown RBP eCLIP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SRP72O76094 671 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 MFN2O95140 757 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 KLRC2P26717 231 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 RFC2P35250 354 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ASMTP46597 345 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 NR1D2Q14995 579 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 FIP1L1Q6UN15 594 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 GPALPP1Q8IXQ4 340 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 RMDN2Q96LZ7 410 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TRIM9Q9C026 710 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ASAH2Q9NR71 780 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 CHORDC1Q9UHD1 332 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PLAAQ9Y263 795 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SPATA31A5Q5VU36 1347 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SPATA31A7Q8IWB4 1347 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 GADD45BO75293 160 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SERPINB7O75635 380 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ACAT1P24752 427 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TBC1D10BQ4KMP7 808 aaPredicted RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 NKAPQ8N5F7 415 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SUSD6Q92537 303 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TDRD3Q9H7E2 651 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 CKLFQ9UBR5 152 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 DNMT3LQ9UJW3 386 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 BMP7P18075 431 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PRCPP42785 496 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ACTRT1Q8TDG2 376 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SIK2Q9H0K1 926 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ATP13A3Q9H7F0 1226 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SYNDIG1Q9H7V2 258 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 RAMP2O60895 175 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 MLH1P40692 756 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PRKCEQ02156 737 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 C6orf10Q5SRN2 563 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 TRIM40Q6P9F5 258 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 RPTNQ6XPR3 784 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 CHSY1Q86X52 802 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 OR56A4Q8NGH8 313 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 INTS13Q9NVM9 706 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 NAV1Q8NEY1 1877 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 AREL1O15033 823 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 UBXN7O94888 489 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 NDUFS1P28331 727 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PJA1Q8NG27 643 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 HSFY1Q96LI6 401 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 FAM161BQ96MY7 647 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 DEFB129Q9H1M3 183 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 PER2O15055 1255 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 NOS3P29474 1203 aa7.36□□□□□ -1.23
CSMD2-210ENST00000619121 ATP5C1P36542 298 aaKnown RBP7.36□□□□□ -1.23
CSMD2-210ENST00000619121 SLC29A2Q14542 456 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms