RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 LILRA2Q8N149 483 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 PCDH20Q8N6Y1 951 aaKnown RBP12.57□□□□□ -0.4
MATR3-227ENST00000618441 PCYOX1LQ8NBM8 494 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 FAM84AQ96KN4 292 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ANO3Q9BYT9 981 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ZNHIT2Q9UHR6 403 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 MINPP1Q9UNW1 487 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 EXOC7Q9UPT5 735 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 AFG3L2Q9Y4W6 797 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 KRT37O76014 449 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 UFL1O94874 794 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 COX4I1P13073 169 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ANXA13P27216 316 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 SLC1A1P43005 524 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 HSPA13P48723 471 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 PMS2P3Q13401 168 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 APOFQ13790 326 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 DLG2Q15700 870 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 FNBP1LQ5T0N5 605 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 IL23RQ5VWK5 629 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 CASC4Q6P4E1 433 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 TRAF7Q6Q0C0 670 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 SLC22A16Q86VW1 577 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 CHID1Q9BWS9 393 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 RPF2Q9H7B2 306 aaKnown RBP12.57□□□□□ -0.4
MATR3-227ENST00000618441 V9GYQ6 96 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 C7orf72A4D263 438 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 AVILO75366 819 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 TGDSO95455 350 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ABHD2P08910 425 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 CPA3P15088 417 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ZNF76P36508 570 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 CPOXP36551 454 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 CCT8P50990 548 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
MATR3-227ENST00000618441 MOGQ16653 247 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ZBED5Q49AG3 693 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 RWDD4Q6NW29 188 aaKnown RBP12.57□□□□□ -0.4
MATR3-227ENST00000618441 SPERTQ8NA61 448 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 ADCY4Q8NFM4 1077 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 RANBP9Q96S59 729 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 C20orf27Q9GZN8 174 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 VPS45Q9NRW7 570 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 GDAP2Q9NXN4 497 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
MATR3-227ENST00000618441 XPO7Q9UIA9 1087 aaKnown RBP12.57□□□□□ -0.4
MATR3-227ENST00000618441 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 SYNDIG1LA6NDD5 238 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 ASNSP08243 561 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 ELK3P41970 407 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 FSCBQ5H9T9 825 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TPH2Q8IWU9 490 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 FEM1CQ96JP0 617 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 CTRCQ99895 268 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 OSBPL11Q9BXB4 747 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 SOX17Q9H6I2 414 aaPredicted RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 PARVGQ9HBI0 331 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 NWD2Q9ULI1 1742 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 AMHP03971 560 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 CD48P09326 243 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 RACK1P63244 317 aaKnown RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 PICALMQ13492 652 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TAF12Q16514 161 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 SNAP47Q5SQN1 464 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 KBTBD6Q86V97 674 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 LENG8Q96PV6 779 aaPredicted RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 PCDHAC1Q9H158 963 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TRIT1Q9H3H1 467 aaKnown RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 SH3GLB2Q9NR46 395 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 MKL2Q9ULH7 1088 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 ILVBLA1L0T0 632 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 KBTBD13C9JR72 458 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 H3BUI4 141 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 AP1G1O43747 822 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TIPRLO75663 272 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 SERPINB2P05120 415 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 GNAO1P09471 354 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TFE3P19532 575 aaPredicted RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 SF3B3Q15393 1217 aaKnown RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 KCTD8Q6ZWB6 473 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 ITIH5Q86UX2 942 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
MATR3-227ENST00000618441 UROC1Q96N76 676 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 IL17RBQ9NRM6 502 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 ANGPTL3Q9Y5C1 460 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 CPQQ9Y646 472 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 LMO7Q8WWI1 1683 aa12.56□□□□□ -0.4
MATR3-227ENST00000618441 H3BNH8 94 aa12.55□□□□□ -0.4
MATR3-227ENST00000618441 MED24O75448 989 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms