RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 TBX4P57082 545 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 ACCSLQ4AC99 568 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 TTC30AQ86WT1 665 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 PSTKQ8IV42 348 aaKnown RBP13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 DDIASQ8IXT1 998 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 NIPA2Q8N8Q9 360 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC35B2Q8TB61 432 aa13.53□□□□□ -0.24
PPP4R3B-206ENST00000616407 LAMB1P07942 1786 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 NDUFS3O75489 264 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 VAPBO95292 243 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 ALADP13716 330 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 ADRA1BP35368 520 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 GCKP35557 465 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 PEX19P40855 299 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 CA9Q16790 459 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 RASIP1Q5U651 963 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 MARC1Q5VT66 337 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 PCDH19Q8TAB3 1148 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 APBB2Q92870 758 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 SYT11Q9BT88 431 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 BCO2Q9BYV7 579 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 BRD8Q9H0E9 1235 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 CNGB3Q9NQW8 809 aa13.52□□□□□ -0.24
PPP4R3B-206ENST00000616407 MAGEB16A2A368 324 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 H0YGN5 161 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 CLGNO14967 610 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 DAB1O75553 588 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 STBD1O95210 358 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 STMN1P16949 149 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 TWF1Q12792 350 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 ARRDC4Q8NCT1 418 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 CMTM5Q96DZ9 223 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 PRDM5Q9NQX1 630 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 KANSL3Q9P2N6 904 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 SCOCQ9UIL1 159 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 GIT1Q9Y2X7 761 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 ACOT9Q9Y305 439 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 STARD13Q9Y3M8 1113 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 NFS1Q9Y697 457 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 KIAA1551Q9HCM1 1747 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 A0A096LPK6 155 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 ENO3P13929 434 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 TSHRP16473 764 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 RPL9P32969 192 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 NDUFV1P49821 464 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 CCDC185Q8N715 623 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 FAM136AQ96C01 138 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 EFHD1Q9BUP0 239 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 C12orf65Q9H3J6 166 aaKnown RBP13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 FBXO44Q9H4M3 255 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 ARMCX1Q9P291 453 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC17A7Q9P2U7 560 aa13.52□□□□□ -0.25
PPP4R3B-206ENST00000616407 CLCNKBP51801 687 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 RABGGTBP53611 331 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 FAM83EQ2M2I3 478 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 ASIC4Q96FT7 647 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SERPINB11Q96P15 392 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 KCTD15Q96SI1 283 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 EML4Q9HC35 981 aaKnown RBP13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 ABCC13Q9NSE7 274 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 F5H5T6 163 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 FCHO1O14526 889 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 PRKAR2AP13861 404 aaKnown RBP13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 NFKB1P19838 968 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 GRK2P25098 689 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 ALDH1A3P47895 512 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 XRCC4Q13426 336 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC1A5Q15758 541 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 STK32AQ8WU08 396 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 PTCH2Q9Y6C5 1203 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 MDM4O15151 490 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 DGKIO75912 1065 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 FAM155BO75949 473 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 PTPN4P29074 926 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 PTPN9P43378 593 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 RECQLP46063 649 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 NPY2RP49146 381 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC11A2P49281 568 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 POU5F1Q01860 360 aaKnown RBP13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SDHAF4Q5VUM1 108 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SPOCK2Q92563 424 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 KAT2BQ92831 832 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 VAT1Q99536 393 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 NFKBIZQ9BYH8 718 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 CACNG4Q9UBN1 327 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
PPP4R3B-206ENST00000616407 APOA4P06727 396 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 BFSP2Q13515 415 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 PDCD2Q16342 344 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 GRTP1Q5TC63 336 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 TAPT1Q6NXT6 567 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms