RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ATG7O95352 703 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 TMED10P49755 219 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 PTAR1Q7Z6K3 402 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 KIAA1143Q96AT1 154 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PEX12O00623 359 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 RSL1D1O76021 490 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 LHX1P48742 406 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ACTR3P61158 418 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 LGALS3BPQ08380 585 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PTGES3Q15185 160 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 ZSCAN4Q8NAM6 433 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 CKAP2Q8WWK9 683 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 ATP13A1Q9HD20 1204 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PHF24Q9UPV7 400 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 FKTNO75072 461 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 VARSP26640 1264 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 DMWDQ09019 674 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 QRICH1Q2TAL8 776 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 CCDC126Q96EE4 140 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ZHX1-C8orf76Q96EF9 292 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PIF1Q9H611 641 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 UBA2Q9UBT2 640 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 RAD51BO15315 384 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 GSSP48637 474 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 DHPSP49366 369 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 MYBPC3Q14896 1274 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 C11orf57Q6ZUT1 292 aaPredicted RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 C16orf59Q7L2K0 433 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PPP1R10Q96QC0 940 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 SH2D3AQ9BRG2 576 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 DCLK3Q9C098 648 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 PCDHGA6Q9Y5G7 932 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ERI2A8K979 691 aaKnown RBP12.91□□□□□ -0.34
TCF4-248ENST00000616053 OR1E1P30953 314 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 NFYCQ13952 458 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 LRRC14Q15048 493 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 DEFB115Q30KQ5 88 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
TCF4-248ENST00000616053 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ZNF862O60290 1169 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 IL1R1P14778 569 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 TRIM51Q9BSJ1 452 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 METTL5Q9NRN9 209 aaKnown RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 RGS10O43665 173 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 TUFMP49411 452 aaKnown RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 ATAT1Q5SQI0 421 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 RASGRP3Q8IV61 690 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ZFP28Q8NHY6 868 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 OTUD7AQ8TE49 926 aaPredicted RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 SCGB2A1O75556 95 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 NDUFA10O95299 355 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ZNF7P17097 686 aaPredicted RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 HSD17B2P37059 387 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 CDH8P55286 799 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 DMPKQ09013 629 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 RAB39AQ14964 217 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 SLC30A5Q8TAD4 765 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 MTA1Q13330 715 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 EPHA7Q15375 998 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 MINDY4Q4G0A6 757 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 RBBP8NLQ8NC74 664 aaPredicted RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 DENND6BQ8NEG7 585 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ZNF780BQ9Y6R6 833 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 KLHL2O95198 593 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ECH1Q13011 328 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 PANX3Q96QZ0 392 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 ETNK1Q9HBU6 452 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 HBS1LQ9Y450 684 aaKnown RBP12.9□□□□□ -0.34
TCF4-248ENST00000616053 ANKRD12Q6UB98 2062 aa12.9□□□□□ -0.34
TCF4-248ENST00000616053 SIN3BO75182 1162 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 APODP05090 189 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 MTHFD1P11586 935 aaKnown RBP12.9□□□□□ -0.35
TCF4-248ENST00000616053 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.35
TCF4-248ENST00000616053 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.35
TCF4-248ENST00000616053 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 CBWD6Q4V339 395 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 TTC39BQ5VTQ0 682 aaPredicted RBP12.9□□□□□ -0.35
TCF4-248ENST00000616053 SSH3Q8TE77 659 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 DEFB129Q9H1M3 183 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 VPS33BQ9H267 617 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 TRIM36Q9NQ86 728 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 ARAP3Q8WWN8 1544 aa12.9□□□□□ -0.35
TCF4-248ENST00000616053 RAD23BP54727 409 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CDH24Q86UP0 819 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
TCF4-248ENST00000616053 COQ7Q99807 217 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms