RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 LAMB4A4D0S4 1761 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPTLC1O15269 473 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 DIAPH2O60879 1101 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 UQCRBP14927 111 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 YBX3P16989 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 C16orf72Q14CZ0 275 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 AFTPHQ6ULP2 937 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLC13A1Q9BZW2 595 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 PIPSLA2A3N6 862 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 EIF4E1BA6NMX2 242 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 KATNA1O75449 491 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM107AO95990 144 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 NFICP08651 508 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 PYGMP11217 842 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 KRT4P19013 534 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CAPZA2P47755 286 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CASP4P49662 377 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CASP8Q14790 479 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 PARP15Q460N3 678 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 OTOP2Q7RTS6 562 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CYP2W1Q8TAV3 490 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CASKIN2Q8WXE0 1202 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 FUBP3Q96I24 572 aaKnown RBP eCLIP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 UNC93B1Q9H1C4 597 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 AGPAT5Q9NUQ2 364 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 APPL1Q9UKG1 709 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 VANGL2Q9ULK5 521 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZMYND8Q9ULU4 1186 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 PCDHA11Q9Y5I1 949 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ANKRD63C9JTQ0 380 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 TSPAN1O60635 241 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 OR1D2P34982 312 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 RPIAP49247 311 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 COLGALT1Q8NBJ5 622 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 HTR3CQ8WXA8 447 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZNF556Q9HAH1 456 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 PCDHAC2Q9Y5I4 1007 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCL16O15467 120 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 FSHRP23945 695 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 GPR1P46091 355 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ORC1Q13415 861 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZKSCAN8Q15776 578 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 LONRF1Q17RB8 773 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 EOGTQ5NDL2 527 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ICE2Q659A1 982 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 CYP4Z1Q86W10 505 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPATA4Q8NEY3 305 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 LPPQ93052 612 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 NAF1Q96HR8 494 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SNX27Q96L92 541 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 PCDH9Q9HC56 1237 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 A0A1W2PQ45 241 aaPredicted RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 A0A1W2PQY0 241 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 TPBGLP0DKB5 382 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 HPGDP15428 266 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 ARID5BQ14865 1188 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 RARS2Q5T160 578 aaKnown RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 KCTD16Q68DU8 428 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 TPGS1Q6ZTW0 290 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 C16orf59Q7L2K0 433 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 DENND1CQ8IV53 801 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 CLYBLQ8N0X4 340 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 BTN2A3PQ96KV6 586 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 IL23AQ9NPF7 189 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 C6orf203Q9P0P8 240 aaPredicted RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 COL16A1Q07092 1604 aaPredicted RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 SPAG7O75391 227 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 SNUPNO95149 360 aaKnown RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 TRUB2O95900 331 aaKnown RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 SOAT1P35610 550 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 GRIN1Q05586 938 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 PARP6Q2NL67 630 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 GJB7Q6PEY0 223 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 RBM23Q86U06 439 aaKnown RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 TRIML2Q8N7C3 387 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 ABHD8Q96I13 439 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 NECTIN4Q96NY8 510 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 LHX5Q9H2C1 402 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 CDV3Q9UKY7 258 aaKnown RBP9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 AP3M1Q9Y2T2 418 aa9.96□□□□□ -0.81
TNFRSF9-204ENST00000615230 A0A0G2JND7 137 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 JCHAINP01591 159 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 KRT6AP02538 564 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 KRT6BP04259 564 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 ITGAXP20702 1163 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 KRT6CP48668 564 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF143P52747 638 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 MRPS5P82675 430 aaKnown RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 PDGFRLQ15198 375 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 ALG11Q2TAA5 492 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 SLC47A2Q86VL8 602 aa9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 CDCA3Q99618 268 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 MRPL1Q9BYD6 325 aaKnown RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 PHPT1Q9NRX4 125 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF9-204ENST00000615230 CFAP97Q9P2B7 532 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms