RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 LRRC40Q9H9A6 602 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 PPLO60437 1756 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 KHDRBS3O75525 346 aaKnown RBP14.06□□□□□ -0.16
CHD1-212ENST00000614616 VBP1P61758 197 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 CCNA1P78396 465 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 BNIP2Q12982 314 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 UTS2BQ765I0 119 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 AMIGO2Q86SJ2 522 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 ADGRF4Q8IZF3 695 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 TMCO6Q96DC7 493 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 CLN6Q9NWW5 311 aa14.06□□□□□ -0.16
CHD1-212ENST00000614616 LCP1P13796 627 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 HOXB6P17509 224 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 GPD1P21695 349 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 PPP3CCP48454 512 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 SLC5A3P53794 718 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 RPL10AP62906 217 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 EFR3AQ14156 821 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ZNF571Q7Z3V5 609 aaPredicted RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 SCFD2Q8WU76 684 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ZNF285Q96NJ3 590 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 PCDHA3Q9Y5H8 950 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 A0A0G2JPF8 293 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 HNRNPCL3B7ZW38 293 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 RECQL5O94762 991 aaPredicted RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 HIST1H2AGP0C0S8 130 aaPredicted RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 HNRNPCL4P0DMR1 293 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 PDGFRAP16234 1089 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 HIST1H2ADP20671 130 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ALDH1B1P30837 517 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 RCVRNP35243 200 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 TNFAIP1Q13829 316 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 TMEM132CQ8N3T6 1108 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 TOR1AIP2Q8NFQ8 470 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 KCTD4Q8WVF5 259 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 HIST1H2AHQ96KK5 128 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 HIST1H2AJQ99878 128 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 H2AFJQ9BTM1 129 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 FAM237BA0A1B0GVD1 139 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 MAGEB16A2A368 324 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 E7ENX8 843 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 TDP2O95551 362 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 POU1F1P28069 291 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ZNF235Q14590 738 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ZNF280DQ6N043 979 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 RP9Q8TA86 221 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 CHMP1AQ9HD42 196 aaPredicted RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 VPS4AQ9UN37 437 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ITM2BQ9Y287 266 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 DHRS12A0PJE2 317 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 CCNT2O60583 730 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 DBTP11182 482 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 ETS1P14921 441 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ANXA11P50995 505 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 NEK3P51956 506 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 CCNG1P51959 295 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 SQLEQ14534 574 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 USP39Q53GS9 565 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 BHLHB9Q6PI77 547 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ANKRD49Q8WVL7 239 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 TMEM47Q9BQJ4 181 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ABCG2Q9UNQ0 655 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 DGKBQ9Y6T7 804 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 PMF1-BGLAPU3KQ54 211 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 XDHP47989 1333 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 PCNAP12004 261 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 MAD2L1Q13257 205 aaPredicted RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 FAM47BQ8NA70 645 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 EHD1Q9H4M9 534 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■□□□□ 8.6
CHD1-212ENST00000614616 LSM3P62310 102 aaKnown RBP14.05□□□□□ -0.16
CHD1-212ENST00000614616 FAM160B2Q86V87 743 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 SMYD1Q8NB12 490 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 SSR3Q9UNL2 185 aa14.05□□□□□ -0.16
CHD1-212ENST00000614616 ILF2Q12905 390 aaKnown RBP14.04□□□□□ -0.16
CHD1-212ENST00000614616 SGO1Q5FBB7 561 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 SIPA1Q96FS4 1042 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 BTNL10A8MVZ5 291 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 CRABP2P29373 138 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 SPANXN3Q5MJ09 141 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 CLNKQ7Z7G1 428 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 RNF148Q8N7C7 305 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 EPB41L4BQ9H329 900 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 GNEQ9Y223 722 aaKnown RBP14.04□□□□□ -0.16
CHD1-212ENST00000614616 PHKG2P15735 406 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 GLRBP48167 497 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 CNTN1Q12860 1018 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 CHSY1Q86X52 802 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 FOPNLQ96NB1 174 aa14.04□□□□□ -0.16
CHD1-212ENST00000614616 TMEM114B3SHH9 223 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms