RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TFDP3Q5H9I0 405 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 MZT2AQ6P582 158 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NIPA1Q7RTP0 329 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SNX32Q86XE0 403 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 FAM71DQ8N9W8 422 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 OR6P1Q8NGX9 317 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TMC2Q8TDI7 906 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SH3KBP1Q96B97 665 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 MCEEQ96PE7 176 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TCF12Q99081 682 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 THUMPD3Q9BV44 507 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PRRG3Q9BZD7 231 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 UBXN6Q9BZV1 441 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 WDR41Q9HAD4 459 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PCYOX1Q9UHG3 505 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZC3H4Q9UPT8 1303 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 M0QX08 132 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 LSM8O95777 96 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 LCP1P13796 627 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 RRM2P31350 389 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 TAF6P49848 677 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 HMGCS2P54868 508 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 LGALS3BPQ08380 585 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PLD1Q13393 1074 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SCARF1Q14162 830 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZC2HC1CQ53FD0 456 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF394Q53GI3 561 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 AGKQ53H12 422 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 DENND1BQ6P3S1 775 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 GLB1LQ6UWU2 654 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ARCQ7LC44 396 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NT5DC3Q86UY8 548 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZDHHC13Q8IUH4 622 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SLC44A5Q8NCS7 719 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SLC7A14Q8TBB6 771 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZHX1-C8orf76Q96EF9 292 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 NARS2Q96I59 477 aaKnown RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF333Q96JL9 665 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 CITED4Q96RK1 184 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 PPP1R16BQ96T49 567 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 MTG1Q9BT17 334 aaPredicted RBP7.03□□□□□ -1.28
CLCN3-211ENST00000613795 RHOBTB2Q9BYZ6 727 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 MYOZ2Q9NPC6 264 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 BAIAP2Q9UQB8 552 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA31D1Q6ZQQ2 1576 aa7.03□□□□□ -1.28
CLCN3-211ENST00000613795 C17orf102A2RUQ5 167 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 CLDN25C9JDP6 229 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 MRASO14807 208 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 ETFBP38117 255 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF135P52742 658 aaPredicted RBP7.02□□□□□ -1.28
CLCN3-211ENST00000613795 CACNB3P54284 484 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 OAZ1P54368 228 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 GEMP55040 296 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 CSE1LP55060 971 aaKnown RBP7.02□□□□□ -1.28
CLCN3-211ENST00000613795 PRKCEQ02156 737 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 TNK2Q07912 1038 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 NRF1Q16656 503 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 C2CD6Q53TS8 623 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 BICRALQ6AI39 1079 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 MFSD5Q6N075 450 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF571Q7Z3V5 609 aaPredicted RBP7.02□□□□□ -1.28
CLCN3-211ENST00000613795 CERKQ8TCT0 537 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 DGCR6LQ9BY27 220 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 CYP3A43Q9HB55 503 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 PCDH18Q9HCL0 1135 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 PREBQ9HCU5 417 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 C12orf4Q9NQ89 552 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 NDFIP2Q9NV92 336 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 PFDN2Q9UHV9 154 aa7.02□□□□□ -1.28
CLCN3-211ENST00000613795 UBA6A0AVT1 1052 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SDR42E2A6NKP2 422 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TRDMT1O14717 391 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TM7SF2O76062 418 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 HOXB6P17509 224 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ADRA1DP25100 572 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RPA3P35244 121 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 GSSP48637 474 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 OXCT1P55809 520 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RPL10AP62906 217 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ENPEPQ07075 957 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 BAATQ14032 418 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SDE2Q6IQ49 451 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 FGD2Q7Z6J4 655 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SLC22A9Q8IVM8 553 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CHORDC1Q9UHD1 332 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ANAPC2Q9UJX6 822 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 FBXO9Q9UK97 447 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SLC39A10Q9ULF5 831 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 FAM237AA0A1B0GTK4 181 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 NR5A2O00482 541 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 VPS4BO75351 444 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ATG7O95352 703 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TPBGLP0DKB5 382 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PABPC1P11940 636 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 COX4I1P13073 169 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PDGFRAP16234 1089 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ATF4P18848 351 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CYP11B2P19099 503 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 WARSP23381 471 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms