RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 C6orf203Q9P0P8 240 aaPredicted RBP22.57■■□□□ 1.2
POLR2J3-220ENST00000613744 hCG_1818297A0A087WSY0 165 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 ARHGAP42A6NI28 874 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 PRR5-ARHGAP8B1AHC4 643 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TNFAIP8O95379 198 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 ARHGAP8P85298 464 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TMPRSS15P98073 1019 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 C1QBPQ07021 282 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 SNRNP35Q16560 246 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TMEM132AQ24JP5 1023 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TEX44Q53QW1 395 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TTC39BQ5VTQ0 682 aaPredicted RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 MFSD7Q6UXD7 560 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TMC7Q7Z402 723 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 SLC25A41Q8N5S1 370 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 CATSPER1Q8NEC5 780 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 ZSWIM2Q8NEG5 633 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 FEZF2Q8TBJ5 459 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 SLC26A7Q8TE54 656 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 POMGNT1Q8WZA1 660 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 CPB2Q96IY4 423 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 ACAP3Q96P50 834 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 SRPK1Q96SB4 655 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 PCDH18Q9HCL0 1135 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 PNPLA8Q9NP80 782 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 PLLPQ9Y342 182 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 DTNAQ9Y4J8 743 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 SIP14410 1827 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 GOLGA8IPA6NC78 632 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 GOLGA8JA6NMD2 632 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 PGM3O95394 542 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 HNRNPCP07910 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 KRT10P13645 584 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 CDC42EP1Q00587 391 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 BFSP2Q13515 415 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 MBTPS1Q14703 1052 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TRIP10Q15642 601 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 NADK2Q4G0N4 442 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TFDP3Q5H9I0 405 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 FBXL19Q6PCT2 694 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 LRRC8DQ7L1W4 858 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 CCDC33Q8N5R6 958 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 ZNF513Q8N8E2 541 aaPredicted RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TTC13Q8NBP0 860 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 WDR83Q9BRX9 315 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 FAM96AQ9H5X1 160 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 AGO3Q9H9G7 860 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 ZNF180Q9UJW8 692 aa22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 HBS1LQ9Y450 684 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-220ENST00000613744 TRIM43BA6NCK2 446 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 SNNO75324 88 aaPredicted RBP22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 BANF1O75531 89 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 CD48P09326 243 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 ATF7P17544 494 aaPredicted RBP22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 ITGB8P26012 769 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 AQP5P55064 265 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 POU5F1BQ06416 359 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 MSS51Q4VC12 460 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 KAZNQ674X7 775 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 CATSPER4Q7RTX7 472 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 TRIM43Q96BQ3 446 aaPredicted RBP22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 NFKBIZQ9BYH8 718 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 PARVAQ9NVD7 372 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 TBX21Q9UL17 535 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 PAIP2BQ9ULR5 123 aaKnown RBP22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 LZTS1Q9Y250 596 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 USTQ9Y2C2 406 aa22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 SF3B1O75533 1304 aaKnown RBP eCLIP22.55■■□□□ 1.2
POLR2J3-220ENST00000613744 TXNDC9O14530 226 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 FAM189A1O60320 539 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 SELPP16109 830 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 ACAT1P24752 427 aaKnown RBP22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 CD97P48960 835 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 RAB15P59190 212 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 PHEXP78562 749 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 CBX3Q13185 183 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 LGSNQ5TDP6 509 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 ARCQ7LC44 396 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 TAS1R2Q8TE23 839 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 ZBTB45Q96K62 511 aaPredicted RBP22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 FZD8Q9H461 694 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 ALPK3Q96L96 1907 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 MYL4P12829 197 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 CD52P31358 61 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 GJC1P36383 396 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 ALDH18A1P54886 795 aaKnown RBP22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 LPIN1Q14693 890 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 AMHR2Q16671 573 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 FBXO47Q5MNV8 452 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 IFNLR1Q8IU57 520 aaPredicted RBP22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 C7orf61Q8IZ16 206 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 DNAJC1Q96KC8 554 aaKnown RBP22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 MFSD14AQ96MC6 490 aa22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 MRPL4Q9BYD3 311 aaKnown RBP22.54■■□□□ 1.2
POLR2J3-220ENST00000613744 GOLGA8SH3BPF8 625 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 GOLGA8MH3BSY2 632 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 COPAP53621 1224 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 NR1H2P55055 460 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 NOMO3P69849 1222 aa22.53■■□□□ 1.2
POLR2J3-220ENST00000613744 APOFQ13790 326 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms