RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 EYSQ5T1H1 3165 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 GOLGA6L7A0A1B0GV03 622 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 SCAMP3O14828 347 aaKnown RBP18.11■□□□□ 0.49
SREK1-216ENST00000612404 ACSL4O60488 711 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 KLKB1P03952 638 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 CEBPBP17676 345 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 PFKLP17858 780 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 ERCC2P18074 760 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 CHRNA3P32297 505 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 ZXDBP98169 803 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 OTUD4Q01804 1114 aaKnown RBP18.11■□□□□ 0.49
SREK1-216ENST00000612404 AUHQ13825 339 aaKnown RBP18.11■□□□□ 0.49
SREK1-216ENST00000612404 ANKRD54Q6NXT1 300 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 C8orf74Q6P047 294 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 ACTL9Q8TC94 416 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 TBC1D31Q96DN5 1066 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 MTCH2Q9Y6C9 303 aa18.11■□□□□ 0.49
SREK1-216ENST00000612404 SOX1O00570 391 aaPredicted RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 RHOXF2BP0C7M4 288 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 TGM2P21980 687 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CCNG2Q16589 344 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CYP1B1Q16678 543 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 NCBP2-AS2Q69YL0 99 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 NADSYN1Q6IA69 706 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CCDC137Q6PK04 289 aaKnown RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 CCDC105Q8IYK2 499 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 MICALL1Q8N3F8 863 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 C12orf50Q8NA57 414 aaPredicted RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 ITFG1Q8TB96 612 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 RHOXF2Q9BQY4 288 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 LRRC19Q9H756 370 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 AMACRQ9UHK6 382 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 AGO1Q9UL18 857 aaKnown RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 C2orf16Q68DN1 1984 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 MAP3K6O95382 1288 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 COILP38432 576 aaPredicted RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 KCNJ1P48048 391 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 NRG1Q02297 640 aaPredicted RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 ADAM15Q13444 863 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 ADGRE1Q14246 886 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CBX2Q14781 532 aaPredicted RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 ERCC6LQ2NKX8 1250 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 MANEALQ5VSG8 457 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CCDC70Q6NSX1 233 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 TTC27Q6P3X3 843 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 TMCO3Q6UWJ1 677 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 ADAMTS19Q8TE59 1207 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 LRRC1Q9BTT6 524 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CFAP97Q9P2B7 532 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CDH22Q9UJ99 828 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 LSM7Q9UK45 103 aaKnown RBP18.1■□□□□ 0.49
SREK1-216ENST00000612404 DNPEPQ9ULA0 475 aa18.1■□□□□ 0.49
SREK1-216ENST00000612404 CLUHO75153 1309 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 DCLK1O15075 740 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 LIASO43766 372 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 PAPLNO95428 1278 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 TACR2P21452 398 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 HTR7P34969 479 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 TUBB4BP68371 445 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 GBE1Q04446 702 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 BYSLQ13895 437 aaKnown RBP18.09■□□□□ 0.49
SREK1-216ENST00000612404 NAA30Q147X3 362 aaPredicted RBP18.09■□□□□ 0.49
SREK1-216ENST00000612404 ACBD5Q5T8D3 534 aaPredicted RBP18.09■□□□□ 0.49
SREK1-216ENST00000612404 FBXL22Q6P050 247 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 RFWD3Q6PCD5 774 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 SYCE2Q6PIF2 218 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 GPR149Q86SP6 731 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 CCDC114Q96M63 670 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 RPRD1AQ96P16 312 aaPredicted RBP18.09■□□□□ 0.49
SREK1-216ENST00000612404 PRMT1Q99873 361 aaKnown RBP18.09■□□□□ 0.49
SREK1-216ENST00000612404 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 PRDM16Q9HAZ2 1276 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 CLDND1Q9NY35 253 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 MPP6Q9NZW5 540 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 CCL26Q9Y258 94 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
SREK1-216ENST00000612404 F5H5T6 163 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 MCF2LO15068 1137 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 FNTAP49354 379 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.49
SREK1-216ENST00000612404 FAM133BQ5BKY9 247 aaKnown RBP18.08■□□□□ 0.49
SREK1-216ENST00000612404 LGI2Q8N0V4 545 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 CCDC33Q8N5R6 958 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 CCDC26Q8TAB7 109 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 AZIN2Q96A70 460 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 ZSWIM3Q96MP5 696 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 ARHGAP26Q9UNA1 814 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 NEU3Q9UQ49 428 aa18.08■□□□□ 0.49
SREK1-216ENST00000612404 LEFTY2O00292 366 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 FGF10O15520 208 aaPredicted RBP18.08■□□□□ 0.48
SREK1-216ENST00000612404 RAD51CO43502 376 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 MFSD11O43934 449 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
SREK1-216ENST00000612404 FSHRP23945 695 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 SLC6A4P31645 630 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 EIF3EP60228 445 aaKnown RBP18.08■□□□□ 0.48
SREK1-216ENST00000612404 DR1Q01658 176 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 ADGRF1Q5T601 910 aa18.08■□□□□ 0.48
SREK1-216ENST00000612404 ZC3H18Q86VM9 953 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms