RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MAGEA12P43365 314 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 DPYSL2Q16555 572 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 GRTP1Q5TC63 336 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 RSPH3Q86UC2 560 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 C1orf127Q8N9H9 656 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 FZD8Q9H461 694 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 PDZD7Q9H5P4 517 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 TIMMDC1Q9NPL8 285 aa22.97■■□□□ 1.27
SHANK2-220ENST00000608988 BARX2Q9UMQ3 279 aaPredicted RBP22.97■■□□□ 1.27
SHANK2-220ENST00000608988 ZBTB12Q9Y330 459 aaPredicted RBP22.97■■□□□ 1.27
SHANK2-220ENST00000608988 WNT10BO00744 389 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 DNAJA2O60884 412 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 STAU1O95793 577 aaKnown RBP22.96■■□□□ 1.27
SHANK2-220ENST00000608988 CAPNS1P04632 268 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 RANBP1P43487 201 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 FRG1Q14331 258 aaKnown RBP22.96■■□□□ 1.27
SHANK2-220ENST00000608988 TLR1Q15399 786 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 HEATR6Q6AI08 1181 aaKnown RBP22.96■■□□□ 1.27
SHANK2-220ENST00000608988 SCYL2Q6P3W7 929 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 ZDHHC17Q8IUH5 632 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 LRGUKQ96M69 825 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 BTBD7Q9P203 1132 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 HMGXB4Q9UGU5 601 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 MID2Q9UJV3 735 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 TNFSF13BQ9Y275 285 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 DOCK1Q14185 1865 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 A0A0A0MRY4 1105 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 IGKV6-21A0A0C4DH24 114 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 WDR27A2RRH5 827 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 KPNA7A9QM74 516 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 VILLO15195 856 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 FBXO21O94952 628 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 TOP3BO95985 862 aaKnown RBP22.96■■□□□ 1.27
SHANK2-220ENST00000608988 GLDCP23378 1020 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 GP5P40197 560 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 ADGRE1Q14246 886 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 CNGA3Q16281 694 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 CDO1Q16878 200 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 TCHHL1Q5QJ38 904 aaPredicted RBP22.96■■□□□ 1.27
SHANK2-220ENST00000608988 RNF149Q8NC42 400 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 SPATA13Q96N96 652 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 CPNE1Q99829 537 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 NGRNQ9NPE2 291 aaKnown RBP22.96■■□□□ 1.27
SHANK2-220ENST00000608988 IRAK4Q9NWZ3 460 aa22.96■■□□□ 1.27
SHANK2-220ENST00000608988 TFAP2AP05549 437 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 PMLP29590 882 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 PRKG1Q13976 671 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 HERC3Q15034 1050 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 KLC3Q6P597 504 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 TICAM1Q8IUC6 712 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 PHTF2Q8N3S3 785 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 UBA3Q8TBC4 463 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 GFM2Q969S9 779 aaKnown RBP22.95■■□□□ 1.26
SHANK2-220ENST00000608988 GCNAQ96QF7 691 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 GPATCH2LQ9NWQ4 482 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 CLIC5Q9NZA1 410 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 TXNDC16Q9P2K2 825 aa22.95■■□□□ 1.26
SHANK2-220ENST00000608988 CNOT11Q9UKZ1 510 aaKnown RBP22.95■■□□□ 1.26
SHANK2-220ENST00000608988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 CAPN8A6NHC0 703 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 DCXO43602 365 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 FARP2O94887 1054 aaPredicted RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 SRGAP2CP0DJJ0 459 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 TYK2P29597 1187 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 PTPN9P43378 593 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 SERPINB8P50452 374 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 PRKAA2P54646 552 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 SLC6A3Q01959 620 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 TMEM132BQ14DG7 1078 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 RAB6CQ53S08 254 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 SPANXN3Q5MJ09 141 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 OLFML1Q6UWY5 402 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 RBM44Q6ZP01 1051 aaKnown RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 KYQ8NBH2 561 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 CXorf38Q8TB03 319 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 NMD3Q96D46 503 aaKnown RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 RAB6CQ9H0N0 254 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 RBM38Q9H0Z9 239 aaKnown RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 COG4Q9H9E3 785 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 LZTS1Q9Y250 596 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 RGSL1A5PLK6 1076 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 HSPA4LO95757 839 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 MPOP05164 745 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 UBA1P22314 1058 aaKnown RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 HDAC4P56524 1084 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 TNFAIP2Q03169 654 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 ORC1Q13415 861 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 KYAT1Q16773 422 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 KCNT2Q6UVM3 1135 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 RP9Q8TA86 221 aaKnown RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 FERMT1Q9BQL6 677 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 TRIM56Q9BRZ2 755 aaKnown RBP22.94■■□□□ 1.26
SHANK2-220ENST00000608988 SLC4A5Q9BY07 1137 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 ASB7Q9H672 318 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 TMEM216Q9P0N5 145 aa22.94■■□□□ 1.26
SHANK2-220ENST00000608988 LCTP09848 1927 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 H0YJX3 145 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 SORBS2O94875 1100 aaKnown RBP22.93■■□□□ 1.26
SHANK2-220ENST00000608988 CRTAMO95727 393 aa22.93■■□□□ 1.26
SHANK2-220ENST00000608988 CCDC166P0CW27 439 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms