RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ALX3O95076 343 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CDH1P12830 882 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 AKR1B1P15121 316 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CD58P19256 250 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 EEF1DP29692 281 aaKnown RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 MAPK4P31152 587 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CACNB3P54284 484 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CTAG1AP78358 180 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CENPCQ03188 943 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 PTK2BQ14289 1009 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 Q3C1V9 767 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 FNBP1LQ5T0N5 605 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 FAM156AQ8NDB6 213 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 FIG4Q92562 907 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ATP6V1E2Q96A05 226 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 IL12RB2Q99665 862 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 RPAP3Q9H6T3 665 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 SCUBE2Q9NQ36 999 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 IQANK1A0A1B0GTG1 560 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 SYCE1LA8MT33 242 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 TOR1BO14657 336 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 IDH3BO43837 385 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ALOX5P09917 674 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CHRNA5P30532 468 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 GNG2P59768 71 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 STK11Q15831 433 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 BBS9Q3SYG4 887 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 SLC9A4Q6AI14 798 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 DCP2Q8IU60 420 aaKnown RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF420Q8TAQ5 688 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 HTRA1Q92743 480 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 CDHR1Q96JP9 859 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF597Q96LX8 424 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 PPCSQ9HAB8 311 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 MOV10Q9HCE1 1003 aaKnown RBP12.89□□□□□ -0.35
CTCFL-218ENST00000608440 UGT2A1Q9Y4X1 527 aa12.89□□□□□ -0.35
CTCFL-218ENST00000608440 ASTN1O14525 1302 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 NUAK1O60285 661 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 GCNT3O95395 438 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 INHBAP08476 426 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 CYP2D6P10635 497 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 COX4I1P13073 169 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 MATN1P21941 496 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 TGM1P22735 817 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 STILQ15468 1287 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 LRIT3Q3SXY7 679 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 SNAP47Q5SQN1 464 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 LLGL2Q6P1M3 1020 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 ZFP1Q6P2D0 407 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 SLC22A16Q86VW1 577 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 ZC3H15Q8WU90 426 aaKnown RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 LRTOMTQ8WZ04 291 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 KAT5Q92993 513 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 DOK1Q99704 481 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 RUSC1Q9BVN2 902 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 C6orf50Q9HD87 102 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 AVENQ9NQS1 362 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 SNTG2Q9NY99 539 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 CLDN25C9JDP6 229 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 CLIC3O95833 236 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 CAPN1P07384 714 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 ECT2LQ008S8 904 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 BFSP2Q13515 415 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 UGT3A1Q6NUS8 523 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 PDCD6IPQ8WUM4 868 aaKnown RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 MASTLQ96GX5 879 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 MAP6Q96JE9 813 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 DHRS4Q9BTZ2 278 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
CTCFL-218ENST00000608440 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
CTCFL-218ENST00000608440 GOLGA8QA0A0J9YX86 632 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 PRSS51A0A1B0GVH4 220 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 GOLGA8OA6NCC3 632 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 TRIM49D1C9J1S8 452 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 GOLGA8NF8WBI6 632 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms