RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 C8orf58Q8NAV2 365 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 CELF1Q92879 486 aaKnown RBP4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 HIC2Q96JB3 615 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 ASB2Q96Q27 587 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 RNF26Q9BY78 433 aaPredicted RBP4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 RMI1Q9H9A7 625 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 CHODLQ9H9P2 273 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 ASNSD1Q9NWL6 643 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 HEMK1Q9Y5R4 338 aaPredicted RBP4.4□□□□□ -1.71
RNU6-88P-201ENST00000606801 LMTK3Q96Q04 1460 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3DA0A087WVF3 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3IA0A087WXS9 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3EA0A087X179 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3KA0A087X1G2 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 CCDC189A1A4V9 331 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3BA6NDS4 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3FA6NER0 549 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 MANSC4A6NHS7 340 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 MBD3L5A6NJ08 208 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3LB9A6J9 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 EIF3FO00303 357 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 IRAK2O43187 625 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TFRCP02786 760 aaKnown RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 CHRM5P08912 532 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3HP0C7X1 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 AARSP49588 968 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 VPS41P49754 854 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 RCAN1P53805 252 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 ACTR2P61160 394 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 RNASELQ05823 741 aaKnown RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 BIRC3Q13489 604 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 CBFBQ13951 182 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 KPNB1Q14974 876 aaKnown RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBRG1Q3YBR2 411 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3GQ6DHY5 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 SUMO4Q6EEV6 95 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3CQ6IPX1 549 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 VSTM1Q6UX27 236 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 SLC39A5Q6ZMH5 540 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 ANKRD18AQ8IVF6 992 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TBC1D3Q8IZP1 549 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 HERVK_113Q902F9 699 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 KTI12Q96EK9 354 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 NUAK2Q9H093 628 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 SLC22A11Q9NSA0 550 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 MTMR4Q9NYA4 1195 aa4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 COPG1Q9Y678 874 aaKnown RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 SIRT4Q9Y6E7 314 aaPredicted RBP4.39□□□□□ -1.71
RNU6-88P-201ENST00000606801 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 UBE2Q2LH0YL09 131 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 PYGLP06737 847 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 CSF1P09603 554 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 LYL1P12980 280 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 CHN1P15882 459 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 RXRAP19793 462 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 SLC8A1P32418 973 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 SOX2P48431 317 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZNF484Q5JVG2 852 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 DPY19L2P1Q6NXN4 242 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 LVRNQ6Q4G3 990 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 RTL10Q7L3V2 364 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 HASPINQ8TF76 798 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 GOLGA1Q92805 767 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 ATP2A3Q93084 1043 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 ARRDC3Q96B67 414 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 C5orf34Q96MH7 638 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 EFHD1Q9BUP0 239 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 RRN3Q9NYV6 651 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 SPATA31A5Q5VU36 1347 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 SPATA31A6Q5VVP1 1343 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 SPATA31A7Q8IWB4 1347 aa4.38□□□□□ -1.71
RNU6-88P-201ENST00000606801 CGB1A6NKQ9 187 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 C3orf70A6NLC5 250 aaPredicted RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 TTC34A8MYJ7 566 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 STX16-NPEPL1H3BU86 382 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 GRM8O00222 908 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 STX16O14662 325 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 CNTN5O94779 1100 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ENO1P06733 434 aaKnown RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 CNPP09543 421 aaKnown RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ACP5P13686 325 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 CCR5P51681 352 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 RBM5P52756 815 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 YPEL5P62699 121 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ADCK5Q3MIX3 580 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 ZNF813Q6ZN06 617 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 C2CD5Q86YS7 1000 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 RHPN2Q8IUC4 686 aa4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 PTGR2Q8N8N7 351 aaPredicted RBP4.37□□□□□ -1.71
RNU6-88P-201ENST00000606801 LINS1Q8NG48 757 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms