RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 NEU3Q9UQ49 428 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HEY1Q9Y5J3 304 aa12.68□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZNF840PA6NDX5 716 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PRRG1O14668 218 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CHADO15335 359 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MFSD11O43934 449 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OPA1O60313 960 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OPHN1O60890 802 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PAGE1O75459 146 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FGF19O95750 216 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 POU2F2P09086 479 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NUDT17P0C025 328 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EPHB2P29323 1055 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ATP5C1P36542 298 aaKnown RBP12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CDK16Q00536 496 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GBE1Q04446 702 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PPIDQ08752 370 aaKnown RBP12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GALNT2Q10471 571 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GPS1Q13098 491 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 C5orf22Q49AR2 442 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 C10orf120Q5SQS8 335 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HECTD3Q5T447 861 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 C1orf228Q6PIY5 440 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GOLGA6L1Q8N7Z2 621 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 KLC2Q9H0B6 622 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PLEKHA4Q9H4M7 779 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LINC01553A4QN01 128 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM72CH0Y354 149 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SOAT2O75908 522 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OLFM2O95897 454 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 OAS1P00973 400 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 IFNB1P01574 187 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CNPP09543 421 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TSHRP16473 764 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HOXA9P31269 272 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CTNNB1P35222 781 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RPL22P35268 128 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HSD17B3P37058 310 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FDFT1P37268 417 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PGFP49763 221 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PMS2P54278 862 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GDF10P55107 478 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SLC10A2Q12908 348 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TAF12Q16514 161 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM72AQ5TYM5 149 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 AFMIDQ63HM1 303 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM72DQ6L9T8 149 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LRRC31Q6UY01 552 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM72BQ86X60 149 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZNF683Q8IZ20 524 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RTL3Q8N8U3 475 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NAT8LQ8N9F0 302 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HTR3CQ8WXA8 447 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZNF512Q96ME7 567 aaPredicted RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TTC25Q96NG3 672 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TSGA13Q96PP4 275 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 KLHL5Q96PQ7 755 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RUFY1Q96T51 708 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SH3GL2Q99962 352 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM118BQ9BPY3 351 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ETNK2Q9NVF9 386 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DPP7Q9UHL4 492 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZMYM5Q9UJ78 669 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HS3ST4Q9Y661 456 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MIA3Q5JRA6 1907 aa12.66□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 A0A0A0MRY4 1105 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 E7ESA3 106 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 E9PAM4 449 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 KCNN4O15554 427 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MSI1O43347 362 aaKnown RBP12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TGM5O43548 720 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ABHD2P08910 425 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RHOQP17081 205 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TPSB2P20231 275 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RBL1P28749 1068 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GARSP41250 739 aaKnown RBP12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CDR1P51861 262 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NDST2P52849 883 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TWF1Q12792 350 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EFEMP1Q12805 493 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 KCNJ11Q14654 390 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TPSAB1Q15661 275 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ARTNQ5T4W7 220 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TMC7Q7Z402 723 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ELMOD1Q8N336 334 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms