RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CCDC26Q8TAB7 109 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 NELL1Q92832 810 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ACDQ96AP0 544 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ACOX2Q99424 681 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
LIG1-219ENST00000600055 SLC2A11Q9BYW1 496 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 SIK2Q9H0K1 926 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 WDCPQ9H6R7 721 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ABCB8Q9NUT2 735 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ARHGEF38Q9NXL2 777 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ADAMTS1Q9UHI8 967 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 HS3ST4Q9Y661 456 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ATG2BQ96BY7 2078 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 F5H5T6 163 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 ADAM23O75077 832 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 F9P00740 461 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 GZMAP12544 262 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 SDC4P31431 198 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 RDXP35241 583 aaKnown RBP15.74■□□□□ 0.11
LIG1-219ENST00000600055 RPL7AP62424 266 aaKnown RBP15.74■□□□□ 0.11
LIG1-219ENST00000600055 BRMS1LQ5PSV4 323 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 PPP1R15BQ5SWA1 713 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 MPP7Q5T2T1 576 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 FBXL22Q6P050 247 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 SARM1Q6SZW1 724 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 SND1Q7KZF4 910 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIG1-219ENST00000600055 ANKS1BQ7Z6G8 1248 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 FAM131BQ86XD5 332 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 MFN1Q8IWA4 741 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 CARNMT1Q8N4J0 409 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 SORCS1Q8WY21 1168 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 IGSF8Q969P0 613 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 ERLEC1Q96DZ1 483 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 MCEEQ96PE7 176 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
LIG1-219ENST00000600055 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 ZSCAN32Q9NX65 697 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 ARHGAP20Q9P2F6 1191 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 MMP17Q9ULZ9 603 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 STARD13Q9Y3M8 1113 aa15.74■□□□□ 0.11
LIG1-219ENST00000600055 BZW2Q9Y6E2 419 aaKnown RBP15.74■□□□□ 0.11
LIG1-219ENST00000600055 TYW5A2RUC4 315 aaKnown RBP15.73■□□□□ 0.11
LIG1-219ENST00000600055 RTN2O75298 545 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 ENDOD1O94919 500 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 GPD1P21695 349 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 CD70P32970 193 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 PLA2G5P39877 138 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 NBL1P41271 181 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 PTPN9P43378 593 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 IRAK1P51617 712 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 ADKP55263 362 aaKnown RBP15.73■□□□□ 0.11
LIG1-219ENST00000600055 MAMLD1Q13495 774 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 AUHQ13825 339 aaKnown RBP15.73■□□□□ 0.11
LIG1-219ENST00000600055 TRIM14Q14142 442 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 FSCBQ5H9T9 825 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 TMC6Q7Z403 805 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 ZBTB44Q8NCP5 570 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 FAM122AQ96E09 287 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 VCPIP1Q96JH7 1222 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 LMLNQ96KR4 655 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 GGA2Q9UJY4 613 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 VANGL2Q9ULK5 521 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 MUC6Q6W4X9 2439 aa15.73■□□□□ 0.11
LIG1-219ENST00000600055 A0A087X0T9 212 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 WASH3PC4AMC7 463 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CCP110O43303 1012 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 LUC7L3O95232 432 aaKnown RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 FAM228BP0C875 321 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 PABPC1P11940 636 aaKnown RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 HNRNPH3P31942 346 aaKnown RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 EIF4A3P38919 411 aaKnown RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 OGDHQ02218 1023 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 LMAN2Q12907 356 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CRY1Q16526 586 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 PLEKHA7Q6IQ23 1121 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 PPP1R2P3Q6NXS1 205 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CHST9Q7L1S5 443 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 KIAA0907Q7Z7F0 614 aaPredicted RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 ADIPOR2Q86V24 386 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIG1-219ENST00000600055 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 KCNV2Q8TDN2 545 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 FAM172AQ8WUF8 416 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CENPIQ92674 756 aaPredicted RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 ZNF653Q96CK0 615 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 RPRD1AQ96P16 312 aaPredicted RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 DNAJC7Q99615 494 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 MAGEB5Q9BZ81 275 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CIPCQ9C0C6 399 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 ISCUQ9H1K1 167 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 ELOVL2Q9NXB9 296 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CACNA2D2Q9NY47 1150 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 CNOT8Q9UFF9 292 aaKnown RBP15.72■□□□□ 0.11
LIG1-219ENST00000600055 PCDHGA2Q9Y5H1 932 aa15.72■□□□□ 0.11
LIG1-219ENST00000600055 H0Y626 953 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 NTSR1P30989 418 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 HOXA6P31267 233 aa15.71■□□□□ 0.11
LIG1-219ENST00000600055 NUMBP49757 651 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms