RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 AOPEPQ8N6M6 819 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 FAM149B1Q96BN6 582 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 KREMEN1Q96MU8 473 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 DDX50Q9BQ39 737 aaKnown RBP19.46■□□□□ 0.71
PNKP-213ENST00000599543 CRACR2AQ9BSW2 395 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 NUP58Q9BVL2 599 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 MIR1-1HGQ9H1L0 117 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 TMEM245Q9H330 911 aa19.46■□□□□ 0.71
PNKP-213ENST00000599543 DNAAF2Q9NVR5 837 aaKnown RBP19.46■□□□□ 0.71
PNKP-213ENST00000599543 A0A1B0GTW7 788 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 GOLGA6L7A0A1B0GV03 622 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 MED7O43513 233 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 ACSL4O60488 711 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 DLDP09622 509 aaKnown RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 SLC6A4P31645 630 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 GPD2P43304 727 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 ACADSBP45954 432 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 SIM1P81133 766 aaPredicted RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 APBA1Q02410 837 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 CAMK2GQ13555 558 aaPredicted RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 KCNJ12Q14500 433 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 DCAF12L1Q5VU92 463 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 MBLAC2Q68D91 279 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 FAM124AQ86V42 546 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 MFN1Q8IWA4 741 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 SCUBE3Q8IX30 993 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 ZCCHC9Q8N567 271 aaKnown RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 ZNF366Q8N895 744 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 HJURPQ8NCD3 748 aaPredicted RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 ENOX1Q8TC92 643 aaKnown RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 DQX1Q8TE96 717 aaKnown RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 DNASE2BQ8WZ79 361 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 AZIN2Q96A70 460 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 TRIM62Q9BVG3 475 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 LHX5Q9H2C1 402 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 FBRSQ9HAH7 460 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 UBE2TQ9NPD8 197 aaPredicted RBP19.45■□□□□ 0.7
PNKP-213ENST00000599543 FANCLQ9NW38 375 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 TAB2Q9NYJ8 693 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 CNTN6Q9UQ52 1028 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 TLR6Q9Y2C9 796 aa19.45■□□□□ 0.7
PNKP-213ENST00000599543 AKAP13Q12802 2813 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 KNL1Q8NG31 2342 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 SPAARA0A1B0GVQ0 90 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 POLR2EP19388 210 aaKnown RBP19.44■□□□□ 0.7
PNKP-213ENST00000599543 SPINK2P20155 84 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 PTMSP20962 102 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 CD70P32970 193 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 GRIK2Q13002 908 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 NNTQ13423 1086 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 PTPRNQ16849 979 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 KIAA0907Q7Z7F0 614 aaPredicted RBP19.44■□□□□ 0.7
PNKP-213ENST00000599543 CCDC117Q8IWD4 279 aaPredicted RBP19.44■□□□□ 0.7
PNKP-213ENST00000599543 WFDC5Q8TCV5 224 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 ADAM33Q9BZ11 813 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 ZDHHC5Q9C0B5 715 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 STIM2Q9P246 746 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 WASF3Q9UPY6 502 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 NAALADL1Q9UQQ1 740 aa19.44■□□□□ 0.7
PNKP-213ENST00000599543 METTL12A8MUP2 240 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 PES1O00541 588 aaKnown RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 CAPN9O14815 690 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 LETM1O95202 739 aaPredicted RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 GNA15P30679 374 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 RPL34P49207 117 aaKnown RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 SLC14A1Q13336 389 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 MEA1Q16626 185 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 NADSYN1Q6IA69 706 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 DENND1BQ6P3S1 775 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 UNQ6494/PRO21346Q6UXR6 183 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 ENOSF1Q7L5Y1 443 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 FAM114A1Q8IWE2 563 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 ADAM32Q8TC27 787 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 FCRL2Q96LA5 508 aaPredicted RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 PRICKLE1Q96MT3 831 aaPredicted RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 FUCA2Q9BTY2 467 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 SCNM1Q9BWG6 230 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 NYNRINQ9P2P1 1898 aaKnown RBP19.43■□□□□ 0.7
PNKP-213ENST00000599543 CHD6Q8TD26 2715 aa19.43■□□□□ 0.7
PNKP-213ENST00000599543 C1QTNF9BB2RNN3 333 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 BCAT2O15382 392 aaPredicted RBP19.42■□□□□ 0.7
PNKP-213ENST00000599543 THAP12O43422 761 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 TOP3BO95985 862 aaKnown RBP19.42■□□□□ 0.7
PNKP-213ENST00000599543 MOCS2O96007 188 aaPredicted RBP19.42■□□□□ 0.7
PNKP-213ENST00000599543 DNTTP04053 509 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 FYNP06241 537 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 PROS1P07225 676 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 C1QTNF9P0C862 333 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 CD59P13987 128 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 MYL5Q02045 173 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 CDH18Q13634 790 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 HNRNPDQ14103 355 aaKnown RBP19.42■□□□□ 0.7
PNKP-213ENST00000599543 TCP11X2Q5H9J9 407 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 CT47A1Q5JQC4 288 aaPredicted RBP19.42■□□□□ 0.7
PNKP-213ENST00000599543 GJB7Q6PEY0 223 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 TRIM65Q6PJ69 517 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 TAC4Q86UU9 113 aa19.42■□□□□ 0.7
PNKP-213ENST00000599543 FIBINQ8TAL6 211 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms