RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SF3B6Q9Y3B4 125 aaKnown RBP10.96□□□□□ -0.65
SMG9-207ENST00000598860 PCDHB4Q9Y5E5 795 aa10.96□□□□□ -0.65
SMG9-207ENST00000598860 IRAK3Q9Y616 596 aa10.96□□□□□ -0.65
SMG9-207ENST00000598860 CAPN6Q9Y6Q1 641 aa10.96□□□□□ -0.65
SMG9-207ENST00000598860 LRRC53A6NM62 1247 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 H7C4K7 107 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 GABRDO14764 452 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 WNT11O96014 354 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 SOD2P04179 222 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 PAEPP09466 180 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 HOXB8P17481 243 aaPredicted RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 ACO1P21399 889 aaKnown RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 PCSK1P29120 753 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 HNRNPH3P31942 346 aaKnown RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 BRCC3P46736 316 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 GFRA1P56159 465 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 APBA1Q02410 837 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 YWHAHQ04917 246 aaPredicted RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 BNIP3Q12983 259 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 KCNC3Q14003 757 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 SMAD2Q15796 467 aaKnown RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 ASIC2Q16515 512 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 KIAA1841Q6NSI8 718 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 ANKRD54Q6NXT1 300 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 TMEM270Q6UE05 265 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 THNSL2Q86YJ6 484 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 FAM71AQ8IYT1 594 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 RNF168Q8IYW5 571 aaPredicted RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 PDCL2Q8N4E4 241 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 SMRP1Q8NCR6 262 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 VN1R2Q8NFZ6 395 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 OR6B3Q8NGW1 331 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 HASPINQ8TF76 798 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 CASP10Q92851 521 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 KAT5Q92993 513 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 HRASLS5Q96KN8 279 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 TNIP3Q96KP6 325 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 PANX2Q96RD6 677 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 ABHD10Q9NUJ1 306 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 AIPL1Q9NZN9 384 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 SFMBT1Q9UHJ3 866 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 AJAP1Q9UKB5 411 aaPredicted RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 L1RE1Q9UN81 338 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 SSX2IPQ9Y2D8 614 aa10.95□□□□□ -0.66
SMG9-207ENST00000598860 GPR55Q9Y2T6 319 aaPredicted RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 BZW2Q9Y6E2 419 aaKnown RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 ZNF638Q14966 1978 aaKnown RBP10.95□□□□□ -0.66
SMG9-207ENST00000598860 GREB1Q4ZG55 1949 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 H0Y8X5 98 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 EFEMP2O95967 443 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 URODP06132 367 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 PTMAP06454 111 aaKnown RBP10.94□□□□□ -0.66
SMG9-207ENST00000598860 WEE2P0C1S8 567 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 MYCLP1P12525 358 aaPredicted RBP10.94□□□□□ -0.66
SMG9-207ENST00000598860 KRT5P13647 590 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 CD58P19256 250 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 KLRC2P26717 231 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 ANXA13P27216 316 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 GNL1P36915 607 aaPredicted RBP10.94□□□□□ -0.66
SMG9-207ENST00000598860 USP8P40818 1118 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 PRKCIP41743 596 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 GLUD2P49448 558 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 PDE6CP51160 858 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 CDK17Q00537 523 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 AMPD2Q01433 879 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 CREMQ03060 361 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 STILQ15468 1287 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 PTPN14Q15678 1187 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 MAPRE1Q15691 268 aaKnown RBP10.94□□□□□ -0.66
SMG9-207ENST00000598860 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 FAM171A1Q5VUB5 890 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 WSCD1Q658N2 575 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 ZNF280DQ6N043 979 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 TAS1R1Q7RTX1 841 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 ADHFE1Q8IWW8 467 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 TC2NQ8N9U0 490 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 CCDC112Q8NEF3 446 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 KCTD13Q8WZ19 329 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 RABGGTAQ92696 567 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 KLHL5Q96PQ7 755 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 GPR88Q9GZN0 384 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 SDCBP2Q9H190 292 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 CDH9Q9ULB4 789 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 KIAA1257Q9ULG3 409 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 USP15Q9Y4E8 981 aaPredicted RBP10.94□□□□□ -0.66
SMG9-207ENST00000598860 SNX11Q9Y5W9 270 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 HCFC2Q9Y5Z7 792 aa10.94□□□□□ -0.66
SMG9-207ENST00000598860 MYO16Q9Y6X6 1858 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 SHISA3A0PJX4 238 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 OR6C75A6NL08 312 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 A8MXQ7 604 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 FOXN3O00409 490 aaPredicted RBP10.93□□□□□ -0.66
SMG9-207ENST00000598860 MED7O43513 233 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 GFPT2O94808 682 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 OAZ2O95190 189 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 SERPING1P05155 500 aa10.93□□□□□ -0.66
SMG9-207ENST00000598860 SNRPB2P08579 225 aaKnown RBP10.93□□□□□ -0.66
SMG9-207ENST00000598860 CNPP09543 421 aaKnown RBP10.93□□□□□ -0.66
SMG9-207ENST00000598860 HOXC12P31275 282 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms