RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RPS24P62847 133 aaKnown RBP14.85□□□□□ -0.03
LIG1-208ENST00000595758 AUHQ13825 339 aaKnown RBP14.85□□□□□ -0.03
LIG1-208ENST00000595758 RABGAP1LQ5R372 815 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 ACBD5Q5T8D3 534 aaPredicted RBP14.85□□□□□ -0.03
LIG1-208ENST00000595758 FBXL22Q6P050 247 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 SCYL2Q6P3W7 929 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 NUDT18Q6ZVK8 323 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 TMTC1Q8IUR5 882 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 CCDC170Q8IYT3 715 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 CFAP52Q8N1V2 620 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 DTWD2Q8NBA8 298 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 CCDC26Q8TAB7 109 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 FNIP1Q8TF40 1166 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 EZH1Q92800 747 aaPredicted RBP14.85□□□□□ -0.03
LIG1-208ENST00000595758 ARHGEF26Q96DR7 871 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 C1orf74Q96LT6 269 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 PRICKLE1Q96MT3 831 aaPredicted RBP14.85□□□□□ -0.03
LIG1-208ENST00000595758 HAPLN3Q96S86 360 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 NUP85Q9BW27 656 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 PACSIN1Q9BY11 444 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 TRIM7Q9C029 511 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 CHRDQ9H2X0 955 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 TMPRSS4Q9NRS4 437 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 CLEC4EQ9ULY5 219 aa14.85□□□□□ -0.03
LIG1-208ENST00000595758 K7EQS6 105 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 TMEM253P0C7T8 217 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 FECHP22830 423 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 GGCXP38435 758 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 TNFRSF4P43489 277 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 C10orf76Q5T2E6 689 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 RNF43Q68DV7 783 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 LRRC31Q6UY01 552 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 C14orf80Q86SX3 495 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 CCDC117Q8IWD4 279 aaPredicted RBP14.84□□□□□ -0.03
LIG1-208ENST00000595758 SFTPA1Q8IWL2 248 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 TERB1Q8NA31 727 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 RPRD1AQ96P16 312 aaPredicted RBP14.84□□□□□ -0.03
LIG1-208ENST00000595758 VANGL2Q9ULK5 521 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 SLC27A6Q9Y2P4 619 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 SNX10Q9Y5X0 201 aa14.84□□□□□ -0.03
LIG1-208ENST00000595758 RNF40O75150 1001 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 RNF8O76064 485 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 CYLC1P35663 651 aaPredicted RBP14.83□□□□□ -0.04
LIG1-208ENST00000595758 NUBP1P53384 320 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 SEC13P55735 322 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 ZNF252P-AS1Q0IIN9 211 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 MTAPQ13126 283 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 SPA17Q15506 151 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 TTC39BQ5VTQ0 682 aaPredicted RBP14.83□□□□□ -0.04
LIG1-208ENST00000595758 Q6ZS52 159 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 SLFN11Q7Z7L1 901 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 MFN1Q8IWA4 741 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 CARNMT1Q8N4J0 409 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 CCDC185Q8N715 623 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 ZNF557Q8N988 423 aaPredicted RBP14.83□□□□□ -0.04
LIG1-208ENST00000595758 IGSF8Q969P0 613 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 NTAN1Q96AB6 310 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 BAG1Q99933 345 aaPredicted RBP14.83□□□□□ -0.04
LIG1-208ENST00000595758 NCAPGQ9BPX3 1015 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 IER2Q9BTL4 223 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 OSBPL2Q9H1P3 480 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 SPATA6Q9NWH7 488 aaPredicted RBP14.83□□□□□ -0.04
LIG1-208ENST00000595758 CTTNBP2NLQ9P2B4 639 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 UVRAGQ9P2Y5 699 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 ANAPC7Q9UJX3 599 aa14.83□□□□□ -0.04
LIG1-208ENST00000595758 MIA3Q5JRA6 1907 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 SOWAHDA6NJG2 315 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 H0Y626 953 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 MYO1FO00160 1098 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 SRGAP2O75044 1071 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 ATG13O75143 517 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 LUC7L3O95232 432 aaKnown RBP14.82□□□□□ -0.04
LIG1-208ENST00000595758 MAGEA1P43355 309 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 GSDMDP57764 484 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 CDH18Q13634 790 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 GAS6Q14393 721 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 PIGHQ14442 188 aaPredicted RBP14.82□□□□□ -0.04
LIG1-208ENST00000595758 C5orf22Q49AR2 442 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 C2orf27AQ580R0 203 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 ANKS1BQ7Z6G8 1248 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 CIR1Q86X95 450 aaPredicted RBP14.82□□□□□ -0.04
LIG1-208ENST00000595758 SPEM1Q8N4L4 309 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 ARFGAP1Q8N6T3 406 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 FIBINQ8TAL6 211 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 ZNF564Q8TBZ8 553 aaPredicted RBP14.82□□□□□ -0.04
LIG1-208ENST00000595758 OR12D3Q9UGF7 316 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 IP6K2Q9UHH9 426 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 INTUQ9ULD6 942 aa14.82□□□□□ -0.04
LIG1-208ENST00000595758 EPN1Q9Y6I3 576 aaPredicted RBP14.82□□□□□ -0.04
LIG1-208ENST00000595758 ZNF318Q5VUA4 2279 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 A0A1B0GVM2 712 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 ANTXRLA6NF34 631 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 TCAF2A6NFQ2 919 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 DRGXA6NNA5 263 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 CHURC1-FNTBB4DL54 471 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 EIF3CLB5ME19 914 aaKnown RBP14.81□□□□□ -0.04
LIG1-208ENST00000595758 PRRT4C9JH25 899 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 E9PAM4 449 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 LCA5LO95447 670 aa14.81□□□□□ -0.04
LIG1-208ENST00000595758 HLA-FP30511 346 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms