RNA–Protein interactions for RNA: ENST00000595369.1

SH2D3A-203, Transcript of SH2 domain containing 3A, humanhuman

TSL 2

Gene SH2D3A, Length 3,493 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-203ENST00000595369 TFB1MQ8WVM0 346 aaKnown RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ABTB1Q969K4 478 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 SIGLEC10Q96LC7 697 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 HAPLN3Q96S86 360 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 CDT1Q9H211 546 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PCDH18Q9HCL0 1135 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 THAP1Q9NVV9 213 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 STYXL1Q9Y6J8 313 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 TMEM233B4DJY2 109 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 GSRP00390 522 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PABPC4LP0CB38 370 aaKnown RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PMLP29590 882 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 CXCR3P49682 368 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 NRF1Q16656 503 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ZNF280DQ6N043 979 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 LAYNQ6UX15 382 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ICA1LQ8NDH6 482 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ERLEC1Q96DZ1 483 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 SLC45A3Q96JT2 553 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 OLFM3Q96PB7 478 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ACAD9Q9H845 621 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 RSAD1Q9HA92 442 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 UBAP1Q9NZ09 502 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 CNTN6Q9UQ52 1028 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 C9JVG2 144 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 SNNO75324 88 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 FARP2O94887 1054 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PTPN7P35236 360 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 IDH3AP50213 366 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 CHN2P52757 468 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 TBL3Q12788 808 aaKnown RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ITGA7Q13683 1181 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 R3HDM1Q15032 1099 aaKnown RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 TTC30AQ86WT1 665 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PPP4R1Q8TF05 950 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 LPAR1Q92633 364 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 C18orf25Q96B23 403 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 LENG8Q96PV6 779 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 TEX13BQ9BXU2 312 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 KLC2Q9H0B6 622 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 COPS7BQ9H9Q2 264 aaPredicted RBP9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 GOLGA2P5Q9HBQ8 144 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 XPNPEP3Q9NQH7 507 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ASNSD1Q9NWL6 643 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 ATXN10Q9UBB4 475 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 PPME1Q9Y570 386 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 NME7Q9Y5B8 376 aa9.28□□□□□ -0.92
SH2D3A-203ENST00000595369 C2CD4BA6NLJ0 364 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 PHGDHO43175 533 aaKnown RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 CLPTM1O96005 669 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 ENO3P13929 434 aaPredicted RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 TSPAN8P19075 237 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 AOC1P19801 751 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 LMO2P25791 158 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 TUBB3Q13509 450 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 MAP7Q14244 749 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 CYTH1Q15438 398 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 HSP90AA5PQ58FG0 334 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 C6orf52Q5T4I8 152 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 TMC7Q7Z402 723 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 DCLK2Q8N568 766 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 OR6B3Q8NGW1 331 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 CEP70Q8NHQ1 597 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 USP33Q8TEY7 942 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 NCSTNQ92542 709 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 NUF2Q9BZD4 464 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 SUDS3Q9H7L9 328 aaPredicted RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 GPAMQ9HCL2 828 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 SYBUQ9NX95 663 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 AKT3Q9Y243 479 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 LSM8O95777 96 aaKnown RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 TFAP2AP05549 437 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 FAM200BP0CF97 657 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 FGF3P11487 239 aaPredicted RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 PSMB4P28070 264 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 GMPSP49915 693 aaPredicted RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 NUDT2P50583 147 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 HDAC4P56524 1084 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 SOWAHAQ2M3V2 549 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 PDPK2PQ6A1A2 396 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 KYAT3Q6YP21 454 aaKnown RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 NIPA2Q8N8Q9 360 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 OR52K1Q8NGK4 314 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 SNRNP27Q8WVK2 155 aaKnown RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 RPL10LQ96L21 214 aaKnown RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 PRPF18Q99633 342 aaKnown RBP9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 NRBP2Q9NSY0 501 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 HSFX1Q9UBD0 423 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 LZTS1Q9Y250 596 aa9.27□□□□□ -0.93
SH2D3A-203ENST00000595369 CLDN5O00501 218 aa9.26□□□□□ -0.93
SH2D3A-203ENST00000595369 NDC80O14777 642 aa9.26□□□□□ -0.93
SH2D3A-203ENST00000595369 VILLO15195 856 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms