RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 TBXAS1P24557 533 aaPredicted RBP16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 SLC6A4P31645 630 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 CD70P32970 193 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 AFF3P51826 1226 aaKnown RBP16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 RFWD3Q6PCD5 774 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 SIX6OS1Q8N1H7 587 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 LMO3Q8TAP4 145 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 TTC17Q96AE7 1141 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 MYO19Q96H55 970 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 TM9SF3Q9HD45 589 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 ARMCX3Q9UH62 379 aaPredicted RBP16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 LHX6Q9UPM6 363 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 ATP6V1DQ9Y5K8 247 aa16.55■□□□□ 0.24
GTF2F1-203ENST00000594213 C10orf142B7Z368 130 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 IRAK2O43187 625 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 ACSL4O60488 711 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 FYNP06241 537 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 ATP5BP06576 529 aaKnown RBP16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 LCP1P13796 627 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 RGS7P49802 495 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 LRRC63Q05C16 580 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 LRMPQ12912 555 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 NADSYN1Q6IA69 706 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 TMPRSS7Q7RTY8 843 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 UNC45BQ8IWX7 931 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 SETD7Q8WTS6 366 aaKnown RBP16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 BIRC7Q96CA5 298 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 MYEOVQ96EZ4 313 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 HSFY1Q96LI6 401 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 TSG101Q99816 390 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 BTBD1Q9H0C5 482 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 SUN2Q9UH99 717 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 INTS6Q9UL03 887 aaKnown RBP16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 BTBD3Q9Y2F9 522 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 ANKRD6Q9Y2G4 727 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 SNX11Q9Y5W9 270 aa16.54■□□□□ 0.24
GTF2F1-203ENST00000594213 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 FLRT2O43155 660 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 TBL1XO60907 577 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 SEMA4FO95754 770 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 CD27P26842 260 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 GRIA4P48058 902 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 RPL34P49207 117 aaKnown RBP16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 FMO5P49326 533 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 KCNT1Q5JUK3 1230 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 NUGGCQ68CJ6 796 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 TMEM270Q6UE05 265 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 FIBINQ8TAL6 211 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 CLEC4CQ8WTT0 213 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 KAT5Q92993 513 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 CCDC34Q96HJ3 373 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 MRGPRX3Q96LB0 322 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 CDC6Q99741 560 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 RSPH9Q9H1X1 276 aaPredicted RBP16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 MTG2Q9H4K7 406 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 SGK2Q9HBY8 427 aa16.53■□□□□ 0.24
GTF2F1-203ENST00000594213 LTFP02788 710 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 POLR2EP19388 210 aaKnown RBP16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 CTSKP43235 329 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 SLC11A2P49281 568 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 TBX4P57082 545 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 ARID5BQ14865 1188 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 ZNF776Q68DI1 518 aaPredicted RBP16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 RHBDD1Q8TEB9 315 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 SNX19Q92543 992 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 GOLGA1Q92805 767 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 IGSF8Q969P0 613 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 SLC39A13Q96H72 371 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 PRICKLE1Q96MT3 831 aaPredicted RBP16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 PCDHB4Q9Y5E5 795 aa16.52■□□□□ 0.24
GTF2F1-203ENST00000594213 LOC400499M0QZD8 3231 aa16.52■□□□□ 0.23
GTF2F1-203ENST00000594213 PIK3R2O00459 728 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 KCNK3O14649 394 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 PAPSS1O43252 624 aaPredicted RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 PCDHGA12O60330 932 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 FBXO21O94952 628 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 CALCAP01258 141 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 DNTTP04053 509 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 IGHV4-34P06331 123 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 BRD2P25440 801 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 RPS24P62847 133 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 COL9A2Q14055 689 aaPredicted RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 SUZ12Q15022 739 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 STILQ15468 1287 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 TEAD4Q15561 434 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 HNRNPA1L2Q32P51 320 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 USP30Q70CQ3 517 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 ZNF557Q8N988 423 aaPredicted RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 KDM1BQ8NB78 822 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 DQX1Q8TE96 717 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 CEP63Q96MT8 703 aa16.51■□□□□ 0.23
GTF2F1-203ENST00000594213 NT5C1BQ96P26 610 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms